Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR6079-201ENST00000635807 62 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 Y_RNA.28-201ENST00000362554 111 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 RNU6-1175P-201ENST00000365200 107 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 Y_RNA.394-201ENST00000383942 103 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 Y_RNA.439-201ENST00000384119 94 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 Y_RNA.471-201ENST00000384312 102 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 Y_RNA.570-201ENST00000384750 101 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 RNU6-440P-201ENST00000390882 105 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 AL031003.1-201ENST00000404229 172 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 RNU5A-5P-201ENST00000411054 116 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.6□□□□□ -2.15
LDB1Q86U70 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 SNORA31.10-201ENST00000516482 106 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 RNU6-988P-201ENST00000519081 107 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.6□□□□□ -2.15
LDB1Q86U70 AL929325.1-201ENST00000603096 117 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
LDB1Q86U70 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.6□□□□□ -2.15
LDB1Q86U70 RNU6-324P-201ENST00000363957 106 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 RNU6-117P-201ENST00000365415 107 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 RNU6-505P-201ENST00000384427 107 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 RNU6-1199P-201ENST00000411249 104 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 MTCO2P12-201ENST00000427426 682 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 RPEP5-201ENST00000441137 268 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 HSPE1P13-201ENST00000451143 297 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.59□□□□□ -2.15
LDB1Q86U70 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.59□□□□□ -2.15
LDB1Q86U70 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.59□□□□□ -2.15
LDB1Q86U70 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 MIR4423-201ENST00000580922 80 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.59□□□□□ -2.15
LDB1Q86U70 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
LDB1Q86U70 AC095038.3-201ENST00000634439 195 ntBASIC1.59□□□□□ -2.15
LDB1Q86U70 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LDB1Q86U70 Y_RNA.148-201ENST00000363557 117 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.58□□□□□ -2.16
LDB1Q86U70 RNU6-203P-201ENST00000384038 104 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 RNU6-1031P-201ENST00000384773 107 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 MIR194-1-201ENST00000384892 85 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 MIR548P-201ENST00000408336 84 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 RPL23AP36-201ENST00000413895 458 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
LDB1Q86U70 AC005042.3-201ENST00000453230 174 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AC091021.1-201ENST00000468051 388 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 RNU6-341P-201ENST00000516973 96 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AC022616.4-201ENST00000522985 181 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.58□□□□□ -2.16
LDB1Q86U70 AC091178.2-201ENST00000584401 117 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AL162424.1-201ENST00000602325 221 ntBASIC1.58□□□□□ -2.16
LDB1Q86U70 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
LDB1Q86U70 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LDB1Q86U70 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LDB1Q86U70 ICE2P2-201ENST00000483823 2787 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 Y_RNA.138-201ENST00000363462 102 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 SNORA63.7-201ENST00000365579 123 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 RNU6-338P-201ENST00000383888 105 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 SNORD63-201ENST00000384262 68 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 Y_RNA.551-201ENST00000384661 102 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 AL034345.1-201ENST00000407768 123 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 HSPE1P24-201ENST00000450782 238 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 RNU6-436P-201ENST00000516171 114 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
LDB1Q86U70 AC124312.5-201ENST00000604451 268 ntBASIC1.57□□□□□ -2.16
LDB1Q86U70 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
LDB1Q86U70 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
LDB1Q86U70 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
LDB1Q86U70 MIR520G-201ENST00000385064 90 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 Y_RNA.645-201ENST00000391229 102 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 RNU2-61P-201ENST00000411069 191 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 AL354751.2-201ENST00000415471 210 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 RNU6-966P-201ENST00000516479 104 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 RNU6-1337P-201ENST00000516525 95 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 RNU6-63P-201ENST00000516690 95 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 Y_RNA.721-201ENST00000517207 102 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 SNORA28-201ENST00000606769 126 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 AC011373.1-201ENST00000607270 237 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 AC021506.2-201ENST00000612354 169 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 AL353997.5-201ENST00000618886 171 ntBASIC1.56□□□□□ -2.16
LDB1Q86U70 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.56□□□□□ -2.16
LDB1Q86U70 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 Y_RNA.11-201ENST00000362375 109 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 Y_RNA.143-201ENST00000363520 106 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 Y_RNA.267-201ENST00000364679 109 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 Y_RNA.331-201ENST00000365267 102 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 SNORA22B-201ENST00000383876 138 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 RNU6-482P-201ENST00000391068 107 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.55□□□□□ -2.16
LDB1Q86U70 RNU7-110P-201ENST00000516891 62 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 Y_RNA.711-201ENST00000516993 102 ntBASIC1.55□□□□□ -2.16
LDB1Q86U70 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.55□□□□□ -2.16
LDB1Q86U70 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms