Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPL21P9-201ENST00000556149 474 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AC015712.3-201ENST00000559380 164 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AL390123.1-201ENST00000603216 237 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AC073413.2-201ENST00000604332 360 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.31-201ENST00000362574 102 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 SNORD14.1-201ENST00000365609 90 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 RNU6-474P-201ENST00000384243 107 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AL390729.2-201ENST00000416137 156 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 U8.20-201ENST00000459445 131 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AC040926.1-201ENST00000530195 238 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 MIR4423-201ENST00000580922 80 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AC022441.3-201ENST00000605737 136 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 MIR8054-201ENST00000620877 86 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AC127459.3-201ENST00000624328 466 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AC134503.1-201ENST00000633048 54 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 MIR6079-201ENST00000635807 62 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 AC091812.1-201ENST00000432235 1948 ntBASIC1.54□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RNU6-117P-201ENST00000365415 107 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.394-201ENST00000383942 103 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 MIR562-201ENST00000384894 95 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RNU6-308P-201ENST00000390957 107 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RN7SKP200-201ENST00000410564 320 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 MTND1P14-201ENST00000427400 950 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 HSPE1P13-201ENST00000451143 297 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RNU7-34P-201ENST00000459394 64 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 AL163540.1-201ENST00000485382 386 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 RNU6-155P-201ENST00000516347 100 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 SNORA31.10-201ENST00000516482 106 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 AL929325.1-201ENST00000603096 117 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 PRR13P7-201ENST00000605538 430 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.53□□□□□ -2.16
NUP54Q7Z3B4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.148-201ENST00000363557 117 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 SNORD1A-201ENST00000364968 72 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.424-201ENST00000384063 103 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 MIR194-1-201ENST00000384892 85 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 RNU6-440P-201ENST00000390882 105 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 AL031003.1-201ENST00000404229 172 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 RPEP5-201ENST00000441137 268 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 AC108210.2-201ENST00000503681 201 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 RNU6-988P-201ENST00000519081 107 ntBASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NUP54Q7Z3B4 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 RNU6-505P-201ENST00000384427 107 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 RNU6-376P-201ENST00000384731 106 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 MIR764-201ENST00000390811 85 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 MTCO2P12-201ENST00000427426 682 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AC005042.3-201ENST00000453230 174 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AC099513.1-201ENST00000490423 301 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 RNU6-341P-201ENST00000516973 96 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 MIR4524B-201ENST00000581569 115 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AC091178.2-201ENST00000584401 117 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AL162424.1-201ENST00000602325 221 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.51□□□□□ -2.17
NUP54Q7Z3B4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 RNU6-324P-201ENST00000363957 106 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 SNORA63.7-201ENST00000365579 123 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 SNORD63-201ENST00000384262 68 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 MIR520G-201ENST00000385064 90 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 MIR548P-201ENST00000408336 84 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 RNU2-61P-201ENST00000411069 191 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 AC027119.1-201ENST00000440877 241 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 AC091021.1-201ENST00000468051 388 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 RNU6-436P-201ENST00000516171 114 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 AC022616.4-201ENST00000522985 181 ntBASIC1.5□□□□□ -2.17
NUP54Q7Z3B4 AC095038.3-201ENST00000634439 195 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 368.3 ms