Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 MIR136-201ENST00000385207 82 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 MT-TY-201ENST00000387409 66 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 RPS29P13-201ENST00000402041 169 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 MIR1257-201ENST00000408490 117 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 ELOCP17-201ENST00000414751 326 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 RNU6-344P-201ENST00000516635 111 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 RNU7-28P-201ENST00000516759 62 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 AC109479.2-201ENST00000517842 174 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 MIR3152-201ENST00000579801 74 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 MIR5692A1-201ENST00000580523 69 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 AC016597.2-201ENST00000613256 341 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 U6.73-201ENST00000619194 103 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.58□□□□□ -2.5
CSPG4Q6UVK1 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MIR802-201ENST00000390235 94 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 RNU2-54P-201ENST00000410299 190 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MTND1P26-201ENST00000440488 538 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AC046134.1-201ENST00000514454 666 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MIR544B-201ENST00000582372 78 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MIR4306-201ENST00000583390 91 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 U6.112-201ENST00000384129 70 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 SNORD38C-201ENST00000384381 69 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MLLT10P1-201ENST00000418346 262 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AC018865.2-201ENST00000423631 129 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AL365184.2-201ENST00000431139 435 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 MIR4762-201ENST00000585261 75 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AP001836.1-201ENST00000604675 523 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AL139286.2-201ENST00000606838 396 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 AC144521.1-201ENST00000607148 956 ntBASIC-0.59□□□□□ -2.5
CSPG4Q6UVK1 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 SNORA25.7-201ENST00000364375 127 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNY4P28-201ENST00000365281 93 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNU6-602P-201ENST00000411155 105 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 MTATP6P17-201ENST00000431030 672 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC079781.2-201ENST00000446424 169 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 MIR18B-201ENST00000454574 71 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC117522.1-201ENST00000509821 380 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC090572.1-201ENST00000519251 160 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC022306.2-201ENST00000617563 647 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC022306.3-201ENST00000619930 550 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC073869.9-201ENST00000641610 120 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC012306.1-201ENST00000423267 114 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AL355994.1-201ENST00000424379 260 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 MTCO1P20-201ENST00000425366 358 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 SCARNA18-201ENST00000459004 134 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 SNORD65B-201ENST00000459126 73 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AGGF1P4-201ENST00000568249 801 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 MIR548AR-201ENST00000582191 57 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC008608.1-201ENST00000603910 127 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 AC245008.1-201ENST00000608123 476 ntBASIC-0.6□□□□□ -2.51
CSPG4Q6UVK1 RNU6-560P-201ENST00000364007 108 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU4-16P-201ENST00000364737 141 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU6-468P-201ENST00000384003 109 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 SNORD28B-201ENST00000390993 75 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RPL23AP75-201ENST00000491601 451 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU6-469P-201ENST00000516253 101 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU2-10P-201ENST00000516375 211 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU6-63P-201ENST00000516690 95 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU6-341P-201ENST00000516973 96 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU6-685P-201ENST00000517088 95 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 RNU7-172P-201ENST00000517125 64 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 AC104072.1-201ENST00000568817 668 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 AC099785.1-201ENST00000605697 437 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 AL450270.1-201ENST00000606160 391 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 MIR6828-201ENST00000636181 60 ntBASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.61□□□□□ -2.51
CSPG4Q6UVK1 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms