Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 CYP2C59P-201ENST00000457790 269 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 MIR1248-201ENST00000629190 106 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 MIR6844-201ENST00000637122 62 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 AC080128.1-201ENST00000474389 1917 ntBASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 SNORA3.2-201ENST00000408221 125 ntBASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-735P-201ENST00000410612 107 ntBASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-971P-201ENST00000516920 106 ntBASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 AC090115.4-201ENST00000609970 188 ntBASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PRPF40BQ6NWY9 MIR539-201ENST00000365690 78 ntBASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-1211P-201ENST00000459179 105 ntBASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 snoU13.26-201ENST00000459452 105 ntBASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 RPS29P21-201ENST00000496272 170 ntBASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 MIR3646-201ENST00000578301 84 ntBASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 AL031274.2-201ENST00000599419 203 ntBASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF40BQ6NWY9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 CENPCP1-201ENST00000533085 2578 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 SNORD21-201ENST00000383953 95 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-136P-201ENST00000384663 107 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-768P-201ENST00000384683 107 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 RNA5SP496-201ENST00000391240 109 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 RNA5SP511-201ENST00000410487 115 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 AC023141.11-201ENST00000508864 202 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 AC096725.1-201ENST00000514266 313 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 SNORA4.4-201ENST00000515921 135 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 MIR4769-201ENST00000584126 77 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 AC108206.1-201ENST00000570186 4159 ntBASIC3.39□□□□□ -1.87
PRPF40BQ6NWY9 ZNF702P-202ENST00000434269 1966 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 SNORD45.3-201ENST00000363836 72 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 Y_RNA.393-201ENST00000383936 102 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 MIR1253-201ENST00000408273 105 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 RNU2-63P-201ENST00000410792 194 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 AC016909.1-201ENST00000415916 166 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 AC010531.2-201ENST00000465012 153 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 AC003982.1-202ENST00000469928 248 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 AC015720.1-201ENST00000565251 277 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 MIR4438-201ENST00000585271 93 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 AC011603.4-201ENST00000611325 277 ntBASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF40BQ6NWY9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 U8.2-201ENST00000363156 134 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 SNORA72-201ENST00000384339 132 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 MIR504-201ENST00000385065 83 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 RNU4-43P-201ENST00000410628 137 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 AC023449.1-201ENST00000454464 154 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 MIR4524B-201ENST00000581569 115 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 TUG1_4.1-201ENST00000619464 181 ntBASIC3.37□□□□□ -1.87
PRPF40BQ6NWY9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 ZNF658B-202ENST00000615961 3375 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-674P-201ENST00000363831 107 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 SNORA75.5-201ENST00000391291 81 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 RN7SKP101-201ENST00000411376 320 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 RPL23AP58-201ENST00000440453 469 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-991P-201ENST00000516168 107 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 RNU7-172P-201ENST00000517125 64 ntBASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PRPF40BQ6NWY9 AL161431.1-201ENST00000618966 4205 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 Y_RNA.542-201ENST00000384641 111 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AL357134.1-201ENST00000445848 426 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AC097462.1-201ENST00000514125 324 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-1333P-201ENST00000516162 93 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AC090142.3-201ENST00000519012 385 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 PRELID2P1-201ENST00000552837 301 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms