Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNA5SP200-201ENST00000516360 103 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 RNU2-34P-201ENST00000516534 121 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 RNU6-861P-201ENST00000516745 106 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 ZNF658B-202ENST00000615961 3375 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.310-201ENST00000365063 113 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 RNA5SP126-201ENST00000365092 109 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.456-201ENST00000384232 111 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 SNORA48.3-201ENST00000391081 134 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 RN7SKP192-201ENST00000411291 327 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AL357134.1-201ENST00000445848 426 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 RPS20P10-201ENST00000451209 253 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 RNU7-141P-201ENST00000459304 62 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AC117454.1-201ENST00000491120 168 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AC091544.4-201ENST00000555268 342 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 MIR1273D-201ENST00000577266 86 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 MIR5692C2-201ENST00000577959 77 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AC013791.1-201ENST00000616619 62 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 FTX_2.1-201ENST00000618816 94 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 AC009831.4-201ENST00000620744 325 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 MIR6132-201ENST00000622083 109 ntBASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC178Q5BJE1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.361-201ENST00000365515 120 ntBASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 Z98742.3-201ENST00000418637 326 ntBASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC178Q5BJE1 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 AL159152.1-201ENST00000635019 2587 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 RNU6-899P-201ENST00000363947 107 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 SNORA6-201ENST00000384033 151 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 RNU6-301P-201ENST00000384277 107 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 MIR221-201ENST00000385135 110 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 SNORA40.19-201ENST00000390846 128 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 SNORA3.2-201ENST00000408221 125 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 RN7SKP51-201ENST00000410781 304 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 RNU7-120P-201ENST00000459334 63 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 MIR4308-201ENST00000580634 81 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 MIR4438-201ENST00000585271 93 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 AC131280.1-202ENST00000624067 4211 ntBASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC178Q5BJE1 MIR340-201ENST00000362125 95 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 RNU6-653P-201ENST00000363074 106 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 RNU4-13P-201ENST00000364019 141 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.555-201ENST00000384673 110 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 RNU6-417P-201ENST00000384712 107 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 RNU6-918P-201ENST00000391219 106 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 MIR1262-201ENST00000408276 93 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AC060773.1-201ENST00000421698 310 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AC104332.1-201ENST00000440471 797 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 RNU6-856P-201ENST00000516959 98 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AC004832.4-201ENST00000608952 331 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 MIR6840-201ENST00000611937 71 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AC022202.1-201ENST00000613515 211 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AL078604.3-201ENST00000615580 211 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AL449363.1-201ENST00000617815 186 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 AC009487.4-201ENST00000624969 3585 ntBASIC2.61□□□□□ -1.99
CCDC178Q5BJE1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 AC068700.1-201ENST00000565862 3754 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.233-201ENST00000364407 101 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U8.7-201ENST00000364940 136 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU4-17P-201ENST00000365598 141 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU6-886P-201ENST00000384319 105 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU2-2P-201ENST00000410396 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 AC074198.2-201ENST00000508153 258 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 AC072026.1-201ENST00000605023 201 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU2-4P-201ENST00000606190 192 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.15-201ENST00000611544 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.16-201ENST00000613119 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.12-201ENST00000613778 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.9-201ENST00000615427 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.11-201ENST00000616345 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.2-201ENST00000616535 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.3-201ENST00000617785 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.19-201ENST00000618602 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 RNU2-1-201ENST00000618664 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.6-201ENST00000619225 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.5-201ENST00000619465 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 U2.10-201ENST00000620268 191 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.6□□□□□ -1.99
CCDC178Q5BJE1 MIR6873-201ENST00000622788 63 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms