Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR1185-2-201ENST00000408687 86 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 TOMM22P2-201ENST00000430735 237 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 HMGN2P3-201ENST00000433603 273 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 HMGN2P5-201ENST00000436882 273 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 MTCO1P44-201ENST00000441935 243 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 AC114982.1-201ENST00000469402 321 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 MIR3910-1-201ENST00000580936 111 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 AC046143.2-201ENST00000609789 160 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 snoZ196.1-201ENST00000625269 89 ntBASIC2.51□□□□□ -2.01
SLC44A4Q53GD3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 RNU6-653P-201ENST00000363074 106 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 RNU6-804P-201ENST00000384286 107 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 RNU6-482P-201ENST00000391068 107 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 SRIP3-201ENST00000413200 219 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 U8.19-201ENST00000459095 133 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.637-201ENST00000459424 114 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 RNU6-346P-201ENST00000516288 111 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 AC121758.2-201ENST00000553271 193 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 MIR3126-201ENST00000577443 74 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 U6.106-201ENST00000636360 105 ntBASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC44A4Q53GD3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 SNORD114-1-201ENST00000362705 72 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 SNORD114-6-201ENST00000364393 72 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.240-201ENST00000364469 95 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 AL135790.2-201ENST00000437701 267 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 MTND5P41-201ENST00000517498 206 ntBASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC44A4Q53GD3 RNU6-801P-201ENST00000364087 105 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 SNORD115-30-201ENST00000364117 82 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 RNU6-763P-201ENST00000390865 106 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AC016909.1-201ENST00000415916 166 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 EDDM3CP-201ENST00000415977 425 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AC074290.1-201ENST00000448883 135 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AC091021.1-201ENST00000468051 388 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 RNU6-948P-201ENST00000516374 107 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AP005660.1-201ENST00000522972 293 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 AC068700.1-201ENST00000565862 3754 ntBASIC2.48□□□□□ -2.01
SLC44A4Q53GD3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AL031003.1-201ENST00000404229 172 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 RPS12P2-201ENST00000439728 269 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 RNU6-498P-201ENST00000459468 107 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 RNU6-221P-201ENST00000459541 99 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SLC44A4Q53GD3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SLC44A4Q53GD3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 RNA5SP99-201ENST00000364020 114 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 SNORA26.5-201ENST00000391215 123 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 MTCO2P33-201ENST00000402100 465 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 RNU6-394P-201ENST00000410735 107 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AL603825.1-201ENST00000438481 80 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AL357134.1-201ENST00000445848 426 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AC025647.1-201ENST00000517879 253 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AC027419.1-201ENST00000522976 328 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AC026271.5-201ENST00000577873 130 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 MIR3144-201ENST00000579460 79 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AC134026.1-201ENST00000623249 2239 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 AC007336.1-201ENST00000576365 3828 ntBASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SLC44A4Q53GD3 RNU4-10P-201ENST00000364383 140 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 491.1 ms