Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.38□□□□□ -2.63
HMGN3Q15651 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.38□□□□□ -2.63
HMGN3Q15651 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.39□□□□□ -2.63
HMGN3Q15651 U8.6-201ENST00000364939 135 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 RNU6-47P-201ENST00000383866 107 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 MTCO3P40-201ENST00000392516 676 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 AC092447.3-201ENST00000426027 686 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.39□□□□□ -2.63
HMGN3Q15651 AC091959.1-201ENST00000495857 238 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 RNU6-323P-201ENST00000521915 107 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 AL358944.1-201ENST00000528537 144 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 AC123904.2-201ENST00000548059 300 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 MIR6740-201ENST00000618268 113 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 AC084368.1-201ENST00000620935 65 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 MTND1P7-201ENST00000632801 297 ntBASIC-1.39□□□□□ -2.63
HMGN3Q15651 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.39□□□□□ -2.63
HMGN3Q15651 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 RNU6-609P-201ENST00000365459 107 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.4□□□□□ -2.63
HMGN3Q15651 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 MIR876-201ENST00000401147 81 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 MIR320B2-201ENST00000408479 138 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 MTATP6P23-201ENST00000440153 476 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 AC010486.3-201ENST00000511602 785 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 SNORA27.4-201ENST00000516650 95 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 AC139792.3-201ENST00000623525 224 ntBASIC-1.4□□□□□ -2.63
HMGN3Q15651 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.41□□□□□ -2.64
HMGN3Q15651 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 MIR635-201ENST00000384830 98 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.41□□□□□ -2.64
HMGN3Q15651 AL359672.1-201ENST00000442302 409 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 SCARNA18-201ENST00000459004 134 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
HMGN3Q15651 RNA5SP395-201ENST00000516567 118 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 AC090572.1-201ENST00000519251 160 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.41□□□□□ -2.64
HMGN3Q15651 AP003168.1-201ENST00000530091 307 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 AL121992.2-201ENST00000606262 256 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 MIR8084-201ENST00000614105 89 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 AC093726.3-201ENST00000637588 150 ntBASIC-1.41□□□□□ -2.64
HMGN3Q15651 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 SNORA63C-201ENST00000364578 129 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 MIR518F-201ENST00000384973 87 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 AC090844.1-201ENST00000422019 156 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 AL158053.1-201ENST00000441503 453 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.42□□□□□ -2.64
HMGN3Q15651 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.42□□□□□ -2.64
HMGN3Q15651 AC010598.1-201ENST00000510378 103 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 AC021146.6-201ENST00000514659 117 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 AC107934.1-201ENST00000522215 217 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 AC006441.5-201ENST00000612680 209 ntBASIC-1.42□□□□□ -2.64
HMGN3Q15651 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 SNORD56.2-201ENST00000363242 71 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.43□□□□□ -2.64
HMGN3Q15651 snoU13.16-201ENST00000459350 104 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 AC105029.1-201ENST00000520250 669 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 AC245297.2-201ENST00000610119 565 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 AC019226.2-201ENST00000625973 424 ntBASIC-1.43□□□□□ -2.64
HMGN3Q15651 RNU6-462P-201ENST00000362659 105 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 RNU6-490P-201ENST00000362985 107 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 RNU6-883P-201ENST00000384597 107 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 MTCO2P8-201ENST00000412213 658 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 SNORD45.4-201ENST00000516629 73 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 AL157687.1-201ENST00000554853 619 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 AC069431.2-201ENST00000604149 1099 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 AC010205.1-201ENST00000616668 449 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 MIR8066-201ENST00000617280 78 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 AC137590.2-201ENST00000619709 240 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 AL162376.1-201ENST00000624117 175 ntBASIC-1.44□□□□□ -2.64
HMGN3Q15651 RNU6-207P-201ENST00000384137 107 ntBASIC-1.45□□□□□ -2.64
HMGN3Q15651 MIR204-201ENST00000385200 110 ntBASIC-1.45□□□□□ -2.64
HMGN3Q15651 RNU6-475P-201ENST00000516073 104 ntBASIC-1.45□□□□□ -2.64
HMGN3Q15651 RNA5SP216-201ENST00000516111 123 ntBASIC-1.45□□□□□ -2.64
HMGN3Q15651 MTND1P5-201ENST00000517906 940 ntBASIC-1.45□□□□□ -2.64
HMGN3Q15651 MIR4762-201ENST00000585261 75 ntBASIC-1.45□□□□□ -2.64
HMGN3Q15651 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.45□□□□□ -2.64
HMGN3Q15651 RNU6-407P-201ENST00000365280 104 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 SNORA22B-201ENST00000383876 138 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 MIR487A-201ENST00000385009 80 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 SSR1P2-201ENST00000415208 787 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 AC018865.2-201ENST00000423631 129 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.46□□□□□ -2.64
HMGN3Q15651 AL138752.1-201ENST00000452964 351 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 RNU6-881P-201ENST00000516813 102 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 RNU6-685P-201ENST00000517088 95 ntBASIC-1.46□□□□□ -2.64
HMGN3Q15651 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 RNU6-61P-201ENST00000365528 109 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 RNU6-354P-201ENST00000383862 107 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 RNU6-116P-201ENST00000384042 109 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 SNORA1-201ENST00000384107 130 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 RNU6-610P-201ENST00000384264 107 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 RNU6-39P-201ENST00000384344 107 ntBASIC-1.47□□□□□ -2.64
HMGN3Q15651 MTCO2P11-201ENST00000431069 680 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms