Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 Y_RNA.428-201ENST00000384078 102 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 Y_RNA.445-201ENST00000384168 102 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MIR190B-201ENST00000401119 79 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MIR548P-201ENST00000408336 84 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MIR1283-1-201ENST00000408494 87 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 PMCHL1-202ENST00000423102 261 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MRPS18CP6-201ENST00000423587 223 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 CST2P1-201ENST00000425770 87 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC099799.1-201ENST00000439809 192 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 snoU13.6-201ENST00000458785 104 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC007215.1-201ENST00000464893 276 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.34□□□□□ -2.19
PTCH1Q13635 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.34□□□□□ -2.19
PTCH1Q13635 RNU6-948P-201ENST00000516374 107 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 RNA5SP121-201ENST00000516537 101 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AL442663.2-201ENST00000554385 511 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC026470.2-201ENST00000561492 181 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 MIR3171-201ENST00000584270 74 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AL355802.3-201ENST00000607571 545 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC100812.1-201ENST00000607622 580 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC087588.2-201ENST00000617667 426 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 AC005562.2-201ENST00000618264 111 ntBASIC1.34□□□□□ -2.19
PTCH1Q13635 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
PTCH1Q13635 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
PTCH1Q13635 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 RNU6-874P-201ENST00000362390 105 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 Y_RNA.28-201ENST00000362554 111 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 Y_RNA.85-201ENST00000363014 111 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 SNORD115-8-201ENST00000363856 82 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 SNORA63D-201ENST00000364359 132 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 SNORD115-38-201ENST00000365037 82 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR153-2-201ENST00000385225 87 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 AC114982.1-201ENST00000469402 321 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 RNU6-1198P-201ENST00000516904 67 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 RNA5SP330-201ENST00000517096 96 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 RNU6-58P-201ENST00000517143 103 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 SNORD116.3-201ENST00000517176 78 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.33□□□□□ -2.2
PTCH1Q13635 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 AC004584.2-201ENST00000570407 410 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR5006-201ENST00000583027 110 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR1244-1-201ENST00000612829 85 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR1244-3-201ENST00000635744 85 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR1244-2-201ENST00000636449 85 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 MIR1244-4-202ENST00000636813 85 ntBASIC1.33□□□□□ -2.2
PTCH1Q13635 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.106-201ENST00000363189 100 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.314-201ENST00000365114 102 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RNU1-115P-201ENST00000365329 160 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.364-201ENST00000365532 101 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 MIR487A-201ENST00000385009 80 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RNU11-5P-201ENST00000391216 129 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 COX6CP10-201ENST00000416832 224 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC060773.1-201ENST00000421698 310 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC092423.1-201ENST00000430165 186 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.32□□□□□ -2.2
PTCH1Q13635 AC027119.1-201ENST00000440877 241 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.32□□□□□ -2.2
PTCH1Q13635 HMGN2P9-201ENST00000476875 229 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC105758.1-201ENST00000506038 399 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.706-201ENST00000516933 99 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RNA5SP54-201ENST00000516951 92 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.711-201ENST00000516993 102 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC144568.1-201ENST00000520139 137 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC023442.1-201ENST00000531247 422 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC027288.2-201ENST00000553028 243 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.32□□□□□ -2.2
PTCH1Q13635 TCL6_2.1-201ENST00000615162 119 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC138305.3-201ENST00000624988 240 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 BX322639.1-202ENST00000423987 2213 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.326-201ENST00000365176 113 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 SNORA22B-201ENST00000383876 138 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.557-201ENST00000384680 107 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 MIR548B-201ENST00000385247 97 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 SNORA69.1-201ENST00000390904 137 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RN7SKP200-201ENST00000410564 320 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
PTCH1Q13635 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 MCFD2P1-201ENST00000417812 300 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.32□□□□□ -2.2
PTCH1Q13635 MTND4P19-201ENST00000446659 478 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 CHEK2P4-201ENST00000450340 246 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 snoU13.27-201ENST00000459278 104 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.32□□□□□ -2.2
PTCH1Q13635 Y_RNA.661-201ENST00000516003 99 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RNU7-4P-201ENST00000516961 62 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 RN7SKP295-201ENST00000517264 153 ntBASIC1.32□□□□□ -2.2
PTCH1Q13635 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms