Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 SNORA27.1-201ENST00000362604 124 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 RNU6-1188P-201ENST00000363795 107 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 RNU6-117P-201ENST00000365415 107 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.97□□□□□ -2.25
SMARCB1Q12824 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.97□□□□□ -2.25
SMARCB1Q12824 SNX2P2-201ENST00000424553 323 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 STAG3L5P-204ENST00000443759 179 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 PCNPP5-201ENST00000452246 481 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.97□□□□□ -2.25
SMARCB1Q12824 RNA5SP20-201ENST00000515976 84 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 RNU7-172P-201ENST00000517125 64 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.97□□□□□ -2.25
SMARCB1Q12824 MIR4778-201ENST00000577635 80 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 MIR3664-201ENST00000579074 99 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 AC022306.2-201ENST00000617563 647 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 MIR6788-201ENST00000618842 66 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 TPTEP1-208ENST00000636884 213 ntBASIC0.97□□□□□ -2.25
SMARCB1Q12824 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SMARCB1Q12824 Y_RNA.122-201ENST00000363331 96 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 Y_RNA.269-201ENST00000364685 89 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 RNU6-407P-201ENST00000365280 104 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 Y_RNA.355-201ENST00000365462 98 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 RNY1P14-201ENST00000384426 108 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SMARCB1Q12824 RNU11-5P-201ENST00000391216 129 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 MTCO3P19-201ENST00000415864 321 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 MRPS18CP6-201ENST00000423587 223 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 CALM2P4-201ENST00000430810 426 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.96□□□□□ -2.26
SMARCB1Q12824 RBMX2P4-201ENST00000441256 376 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 RPL30P15-201ENST00000457129 321 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 RNU6-625P-201ENST00000459412 107 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 AC074133.1-201ENST00000515696 183 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 AL078603.1-201ENST00000603824 313 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 PISRT1.1-201ENST00000616930 107 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 AL513423.1-201ENST00000621695 132 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 AC099654.5-201ENST00000636479 350 ntBASIC0.96□□□□□ -2.26
SMARCB1Q12824 SNORA1B-201ENST00000362535 133 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNU6-961P-201ENST00000363893 105 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNY3P11-201ENST00000364153 102 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNU6-42P-201ENST00000384165 107 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNU6-1065P-201ENST00000384513 106 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNU6-950P-201ENST00000384651 107 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 MIR660-201ENST00000385235 97 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 U8.16-201ENST00000391279 133 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 SNORD12B-201ENST00000410433 91 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 AL137792.2-201ENST00000443484 235 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 MTCO3P10-201ENST00000455912 772 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 OR9P1P-201ENST00000496431 281 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNU6-63P-201ENST00000516690 95 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNA5SP404-201ENST00000517118 132 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.95□□□□□ -2.26
SMARCB1Q12824 MIR3674-201ENST00000636576 68 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 AC068647.2-201ENST00000637380 353 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 AC005592.1-201ENST00000566527 1640 ntBASIC0.95□□□□□ -2.26
SMARCB1Q12824 RNU6-1283P-201ENST00000365314 105 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 Y_RNA.361-201ENST00000365515 120 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RNU6-890P-201ENST00000384121 107 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RNU6-424P-201ENST00000384367 105 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 Y_RNA.498-201ENST00000384460 102 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 SNORD41-201ENST00000386967 70 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 SNORA75.6-201ENST00000391318 127 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AL034345.1-201ENST00000407768 123 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
SMARCB1Q12824 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.94□□□□□ -2.26
SMARCB1Q12824 RPL23AP50-201ENST00000434149 455 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
SMARCB1Q12824 snoU13.18-201ENST00000459483 104 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RPL39P38-201ENST00000467018 153 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AC022493.2-201ENST00000506122 481 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RNU6-966P-201ENST00000516479 104 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RNU6-1291P-201ENST00000516591 104 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RNU6-922P-201ENST00000516753 99 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AC005899.2-201ENST00000584353 90 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 AC073349.3-201ENST00000617616 186 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.94□□□□□ -2.26
SMARCB1Q12824 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.94□□□□□ -2.26
SMARCB1Q12824 SNORD3E-202ENST00000627253 216 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.94□□□□□ -2.26
SMARCB1Q12824 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
SMARCB1Q12824 MIRLET7C-201ENST00000362160 84 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 Y_RNA.243-201ENST00000364481 109 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 Y_RNA.592-201ENST00000410274 109 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 RNU5A-5P-201ENST00000411054 116 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 UBE2V1P7-201ENST00000446395 340 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 AC093850.1-201ENST00000454121 251 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 Y_RNA.635-201ENST00000459041 101 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms