Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 USP9YP25-201ENST00000457708 443 ntBASIC-1□□□□□ -2.57
CPSF1Q10570 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1□□□□□ -2.57
CPSF1Q10570 AC079140.5-201ENST00000507882 310 ntBASIC-1□□□□□ -2.57
CPSF1Q10570 AC005178.1-201ENST00000508392 440 ntBASIC-1□□□□□ -2.57
CPSF1Q10570 AC022616.3-201ENST00000523940 148 ntBASIC-1□□□□□ -2.57
CPSF1Q10570 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1□□□□□ -2.57
CPSF1Q10570 CR383656.4-201ENST00000546909 122 ntBASIC-1□□□□□ -2.57
CPSF1Q10570 AC137590.2-201ENST00000619709 240 ntBASIC-1□□□□□ -2.57
CPSF1Q10570 RNU6-873P-201ENST00000363833 107 ntBASIC-1.01□□□□□ -2.57
CPSF1Q10570 RNU6-715P-201ENST00000365204 103 ntBASIC-1.01□□□□□ -2.57
CPSF1Q10570 RNU6-376P-201ENST00000384731 106 ntBASIC-1.01□□□□□ -2.57
CPSF1Q10570 AL390729.2-201ENST00000416137 156 ntBASIC-1.01□□□□□ -2.57
CPSF1Q10570 SUMO1P3-201ENST00000439961 304 ntBASIC-1.01□□□□□ -2.57
CPSF1Q10570 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.01□□□□□ -2.57
CPSF1Q10570 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.01□□□□□ -2.57
CPSF1Q10570 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.02□□□□□ -2.57
CPSF1Q10570 RNU6-433P-201ENST00000363216 104 ntBASIC-1.02□□□□□ -2.57
CPSF1Q10570 SNORD87-201ENST00000364849 89 ntBASIC-1.02□□□□□ -2.57
CPSF1Q10570 MTCO2P29-201ENST00000465212 189 ntBASIC-1.02□□□□□ -2.57
CPSF1Q10570 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.02□□□□□ -2.57
CPSF1Q10570 AC022306.3-201ENST00000619930 550 ntBASIC-1.02□□□□□ -2.57
CPSF1Q10570 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.03□□□□□ -2.57
CPSF1Q10570 SNORD83B-201ENST00000386745 93 ntBASIC-1.03□□□□□ -2.57
CPSF1Q10570 RPL22P17-201ENST00000438729 315 ntBASIC-1.03□□□□□ -2.57
CPSF1Q10570 MIR18B-201ENST00000454574 71 ntBASIC-1.03□□□□□ -2.57
CPSF1Q10570 RNU6-897P-201ENST00000517135 105 ntBASIC-1.03□□□□□ -2.57
CPSF1Q10570 MIR6514-201ENST00000622549 70 ntBASIC-1.03□□□□□ -2.57
CPSF1Q10570 SNORD115-7-201ENST00000365306 82 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 RNU6-245P-201ENST00000384020 107 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 SNORA3B-201ENST00000391305 131 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.04□□□□□ -2.58
CPSF1Q10570 SPINT5P-201ENST00000448174 155 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 AC046134.1-201ENST00000514454 666 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 RNU6-504P-201ENST00000516568 104 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 MTND1P5-201ENST00000517906 940 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 MTATP6P15-201ENST00000527233 835 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 MIR548AD-201ENST00000584780 82 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.04□□□□□ -2.58
CPSF1Q10570 AL139418.1-201ENST00000613613 177 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 uc_338.4-201ENST00000616635 176 ntBASIC-1.04□□□□□ -2.58
CPSF1Q10570 SNORD114-14-201ENST00000362723 75 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 RNU6-125P-201ENST00000384505 107 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 RPL21P38-201ENST00000418090 167 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.05□□□□□ -2.58
CPSF1Q10570 AC092447.3-201ENST00000426027 686 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.05□□□□□ -2.58
CPSF1Q10570 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.05□□□□□ -2.58
CPSF1Q10570 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 SNORA25.17-201ENST00000517184 124 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 NAMPTP3-201ENST00000569273 224 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.05□□□□□ -2.58
CPSF1Q10570 MIR4752-201ENST00000579672 72 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 MIR4762-201ENST00000585261 75 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 AF250324.2-201ENST00000608299 610 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 AC006386.1-201ENST00000619436 415 ntBASIC-1.05□□□□□ -2.58
CPSF1Q10570 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 MIR501-201ENST00000390204 84 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 AL365184.2-201ENST00000431139 435 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC119618.1-201ENST00000434191 222 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 SCARNA18-201ENST00000459004 134 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC116353.3-201ENST00000511215 249 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 RNA5SP54-201ENST00000516951 92 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC018448.1-201ENST00000552843 316 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC121247.2-201ENST00000604776 136 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 RNU6-227P-201ENST00000362865 103 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 U8.5-201ENST00000364528 136 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 SNORD28B-201ENST00000390993 75 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 MTND2P3-201ENST00000452458 470 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 RNU7-185P-201ENST00000459215 60 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 MTCO2P6-201ENST00000463134 685 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 RNA5SP47-201ENST00000517230 109 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 AC090617.3-201ENST00000573670 475 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 RNU1-29P-201ENST00000606574 126 ntBASIC-1.06□□□□□ -2.58
CPSF1Q10570 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 RNU4-1-201ENST00000363925 141 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 MTCO2P3-201ENST00000442543 421 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 MTND4P18-201ENST00000447010 465 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 EPS15P1-201ENST00000448836 336 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 RNU7-62P-201ENST00000458856 62 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
CPSF1Q10570 AC010587.1-201ENST00000505809 469 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 AC091885.1-201ENST00000506658 268 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.07□□□□□ -2.58
CPSF1Q10570 MIR3925-201ENST00000584674 77 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 BNIP3P39-201ENST00000601077 554 ntBASIC-1.07□□□□□ -2.58
CPSF1Q10570 MIR148A-201ENST00000362215 68 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNU4-32P-201ENST00000363404 141 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNU6-413P-201ENST00000384115 107 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms