Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 SNORA40.18-201ENST00000391200 128 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 SNORA26.9-201ENST00000391322 122 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 RNU2-7P-201ENST00000410794 178 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 AL358176.2-201ENST00000425769 204 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 RPL23AP3-201ENST00000453844 468 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF543Q08ER8 AL773524.1-201ENST00000614065 229 ntBASIC2.19□□□□□ -2.06
ZNF543Q08ER8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.286-201ENST00000364813 102 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RNU6-806P-201ENST00000365147 105 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RNU6-290P-201ENST00000365212 101 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RNU6-376P-201ENST00000384731 106 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 Y_RNA.569-201ENST00000384749 103 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RNU6-1105P-201ENST00000384774 107 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 MIR562-201ENST00000384894 95 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.18□□□□□ -2.06
ZNF543Q08ER8 CYCSP49-201ENST00000420810 319 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RPL23AP6-201ENST00000446637 472 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 HSPE1P25-201ENST00000455484 251 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RPS26P45-201ENST00000471748 340 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AC098869.1-201ENST00000481627 292 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.18□□□□□ -2.06
ZNF543Q08ER8 DEFB122-202ENST00000569013 197 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.18□□□□□ -2.06
ZNF543Q08ER8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.18□□□□□ -2.06
ZNF543Q08ER8 RNU6-1309P-201ENST00000363305 108 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 SNORA33-201ENST00000363664 130 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 RPL21P38-201ENST00000418090 167 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 AC245047.4-201ENST00000433189 144 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 AC015712.3-201ENST00000559380 164 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 MIR4524B-201ENST00000581569 115 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 DEFB117-201ENST00000602356 141 ntBASIC2.17□□□□□ -2.06
ZNF543Q08ER8 snoU2_19.2-201ENST00000363024 80 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 RNU6-102P-201ENST00000384485 104 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ZNF543Q08ER8 MIR1302-3-201ENST00000408128 138 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 MIR1302-6-201ENST00000408466 90 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.16□□□□□ -2.06
ZNF543Q08ER8 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 RNA5SP481-201ENST00000516814 122 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.16□□□□□ -2.06
ZNF543Q08ER8 AC073413.2-201ENST00000604332 360 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 U6.108-201ENST00000637764 58 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
ZNF543Q08ER8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
ZNF543Q08ER8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
ZNF543Q08ER8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
ZNF543Q08ER8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
ZNF543Q08ER8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.47-201ENST00000362697 108 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.84-201ENST00000363011 104 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 Y_RNA.136-201ENST00000363444 102 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 RNU6-326P-201ENST00000365480 107 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF543Q08ER8 RNU6-514P-201ENST00000384208 107 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 RNU6-950P-201ENST00000384651 107 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ZNF543Q08ER8 RNU6-855P-201ENST00000410395 104 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 AC009310.1-201ENST00000414414 451 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF543Q08ER8 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 HMGN1P10-201ENST00000474557 553 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 MTCO2P24-201ENST00000515611 426 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 RNU2-31P-201ENST00000516954 155 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 RNU7-128P-201ENST00000517247 62 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 IGLV3-17-201ENST00000519099 244 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.15□□□□□ -2.07
ZNF543Q08ER8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF543Q08ER8 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 MIR8062-201ENST00000621515 85 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
ZNF543Q08ER8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF543Q08ER8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF543Q08ER8 SNORA63D-201ENST00000364359 132 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 MIR215-201ENST00000384858 110 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 MIR144-201ENST00000384886 86 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 TRBVB-201ENST00000477100 408 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 AC107393.1-201ENST00000512403 346 ntBASIC2.14□□□□□ -2.07
ZNF543Q08ER8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms