Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR491-201ENST00000384877 84 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 MIR183-201ENST00000384958 110 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 MIR561-201ENST00000385216 97 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH1Q08174 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 AC233266.1-201ENST00000454518 96 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 MRPS17P9-201ENST00000511924 393 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 AC242852.1-201ENST00000612151 96 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 AC244015.1-201ENST00000622301 99 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 AL136360.1-201ENST00000503377 1900 ntBASIC3.16□□□□□ -1.9
PCDH1Q08174 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDH1Q08174 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH1Q08174 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDH1Q08174 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDH1Q08174 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
PCDH1Q08174 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.9
PCDH1Q08174 Y_RNA.253-201ENST00000364562 112 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 MIR548A3-201ENST00000385297 97 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH1Q08174 SNRPGP10-201ENST00000432323 225 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 AC018634.1-201ENST00000437554 401 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH1Q08174 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 RNU6-1291P-201ENST00000516591 104 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 SCARNA13-201ENST00000516672 275 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 RNU6-667P-201ENST00000517186 102 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH1Q08174 AL022345.2-201ENST00000606307 135 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 AL359075.3-201ENST00000613288 217 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
PCDH1Q08174 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH1Q08174 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH1Q08174 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH1Q08174 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH1Q08174 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH1Q08174 MTND5P32-201ENST00000560711 1802 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH1Q08174 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH1Q08174 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 AC063976.4-201ENST00000421971 163 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 AL353689.1-201ENST00000438895 199 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 MTATP6P21-201ENST00000440681 189 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 RNU6-781P-201ENST00000516377 101 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 MIR3129-201ENST00000581095 76 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 U6.105-201ENST00000637379 88 ntBASIC3.14□□□□□ -1.91
PCDH1Q08174 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH1Q08174 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH1Q08174 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH1Q08174 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH1Q08174 AC018630.2-201ENST00000534866 2403 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 SNORA1-201ENST00000384107 130 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 MIR490-201ENST00000384865 128 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 SNORA12.1-201ENST00000390873 148 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 RNA5SP467-201ENST00000391274 118 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH1Q08174 AF228730.3-201ENST00000436691 102 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 RNU6-1041P-201ENST00000516254 102 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
PCDH1Q08174 MIR2682-201ENST00000580305 110 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 MIR3200-201ENST00000580767 85 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 MIR7975-201ENST00000619350 68 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 MIR338-201ENST00000636369 67 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 AL365361.1-201ENST00000566942 3481 ntBASIC3.13□□□□□ -1.91
PCDH1Q08174 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH1Q08174 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCDH1Q08174 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
PCDH1Q08174 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDH1Q08174 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 SNORD116-21-201ENST00000384507 92 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 RNU6-220P-201ENST00000390919 107 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 Y_RNA.651-201ENST00000459380 103 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 RN7SKP19-201ENST00000516016 252 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 RNU6-341P-201ENST00000516973 96 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 MIR3613-201ENST00000579844 87 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 MIR5195-201ENST00000583555 115 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 AC008507.4-201ENST00000585464 127 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 AL121890.5-201ENST00000620848 304 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 MIR6079-201ENST00000635807 62 ntBASIC3.12□□□□□ -1.91
PCDH1Q08174 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDH1Q08174 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH1Q08174 Y_RNA.267-201ENST00000364679 109 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 Y_RNA.346-201ENST00000365385 112 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 RNU6-1292P-201ENST00000383856 107 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 SNORD24-201ENST00000383884 75 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 MIRLET7F2-201ENST00000385277 83 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 EDDM3CP-201ENST00000415977 425 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms