Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR516B1-201ENST00000385211 90 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 MTCO2P33-201ENST00000402100 465 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 AC244670.1-201ENST00000436879 112 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 MTCYBP42-201ENST00000444653 1130 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-2.13□□□□□ -2.75
TFF3Q07654 RNU6-1265P-201ENST00000516342 103 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 SNORA25.13-201ENST00000516395 103 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 RNU6-1116P-201ENST00000517269 99 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 RNU6-86P-201ENST00000606534 107 ntBASIC-2.13□□□□□ -2.75
TFF3Q07654 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 RPL39P6-201ENST00000448289 150 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 ZNF114P1-201ENST00000453500 292 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 RNU7-62P-201ENST00000458856 62 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 RNU6-953P-201ENST00000459154 107 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-2.14□□□□□ -2.75
TFF3Q07654 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-2.14□□□□□ -2.75
TFF3Q07654 MTND1P36-201ENST00000522384 936 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 AC087883.1-201ENST00000551882 391 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 AC120024.3-201ENST00000603167 156 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 5S_rRNA.15-201ENST00000611169 127 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 RMST_7.1-201ENST00000621935 268 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 AC103706.2-201ENST00000638080 240 ntBASIC-2.14□□□□□ -2.75
TFF3Q07654 MIR517B-201ENST00000385102 67 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-2.15□□□□□ -2.75
TFF3Q07654 USP9YP16-201ENST00000430287 407 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 SNRPGP10-201ENST00000432323 225 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 SNORD123-201ENST00000459473 70 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 RPL7P42-201ENST00000481005 679 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 AL157687.1-201ENST00000554853 619 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 MIR3146-201ENST00000580367 79 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 AC010608.3-201ENST00000625048 527 ntBASIC-2.15□□□□□ -2.75
TFF3Q07654 Y_RNA.42-201ENST00000362660 108 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 RNU6-726P-201ENST00000364680 107 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 AC117470.1-201ENST00000381974 330 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 AC078809.1-201ENST00000427601 140 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 AC022137.1-201ENST00000483735 151 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 AC087894.1-201ENST00000538359 518 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-2.16□□□□□ -2.76
TFF3Q07654 AL359547.2-201ENST00000615810 418 ntBASIC-2.16□□□□□ -2.76
TFF3Q07654 RNU6-900P-201ENST00000384498 102 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 RNU6-901P-201ENST00000384593 106 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 MIR487A-201ENST00000385009 80 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 AL158050.1-201ENST00000416077 457 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-2.17□□□□□ -2.76
TFF3Q07654 RNU6-914P-201ENST00000516749 109 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 AC008536.2-201ENST00000607284 349 ntBASIC-2.17□□□□□ -2.76
TFF3Q07654 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-2.17□□□□□ -2.76
TFF3Q07654 RNU6-125P-201ENST00000384505 107 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 MIR516B2-201ENST00000385190 85 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 U8.15-201ENST00000390947 134 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 SNORA75.4-201ENST00000391278 119 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-2.18□□□□□ -2.76
TFF3Q07654 SNORD54-201ENST00000459159 67 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 snoU83B.1-201ENST00000517136 88 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 AL022154.1-201ENST00000604698 785 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 AC108747.1-201ENST00000609508 535 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 AC022306.2-201ENST00000617563 647 ntBASIC-2.18□□□□□ -2.76
TFF3Q07654 Y_RNA.12-201ENST00000362393 112 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 RNU6-1284P-201ENST00000363701 100 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 SNORA36A-201ENST00000384221 132 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 Y_RNA.494-201ENST00000384432 111 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 MIR8485-201ENST00000401372 91 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 RNU6-221P-201ENST00000459541 99 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 AL133153.1-201ENST00000557756 303 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 MTND1P8-201ENST00000571424 950 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-2.19□□□□□ -2.76
TFF3Q07654 BNIP3P39-201ENST00000601077 554 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 uc_338.4-201ENST00000616635 176 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 MTND5P42-201ENST00000637720 498 ntBASIC-2.19□□□□□ -2.76
TFF3Q07654 RNU6-839P-201ENST00000363347 108 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 Y_RNA.430-201ENST00000384081 110 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 Y_RNA.577-201ENST00000384794 101 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 MIR124-2-201ENST00000385081 109 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 Y_RNA.617-201ENST00000410920 90 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-2.2□□□□□ -2.76
TFF3Q07654 AC068587.4-201ENST00000533893 186 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-2.2□□□□□ -2.76
TFF3Q07654 MIR4520-1-201ENST00000582609 70 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 AC087683.1-201ENST00000591187 441 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 AC069431.2-201ENST00000604149 1099 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 MIR8066-201ENST00000617280 78 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 AL445264.1-201ENST00000621719 171 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 AC126544.2-201ENST00000625174 749 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 snoZ196.1-201ENST00000625269 89 ntBASIC-2.2□□□□□ -2.76
TFF3Q07654 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-2.21□□□□□ -2.76
TFF3Q07654 SNORA1B-201ENST00000362535 133 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 RNU6-1175P-201ENST00000365200 107 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 MIR586-201ENST00000385035 97 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 RNA5SP475-201ENST00000410568 110 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 RNU7-57P-201ENST00000459540 60 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 HSPE1P23-201ENST00000509838 286 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 RNU6-341P-201ENST00000516973 96 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 Y_RNA.715-201ENST00000517082 110 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 AC010332.2-201ENST00000613083 1904 ntBASIC-2.21□□□□□ -2.76
TFF3Q07654 SNORD115-28-201ENST00000363931 81 ntBASIC-2.22□□□□□ -2.76
TFF3Q07654 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-2.22□□□□□ -2.76
TFF3Q07654 BX276092.1-201ENST00000427368 251 ntBASIC-2.22□□□□□ -2.76
TFF3Q07654 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-2.22□□□□□ -2.76
TFF3Q07654 AL031667.1-201ENST00000440222 725 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms