Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-1105P-201ENST00000384774 107 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 MIR597-201ENST00000384968 97 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.31□□□□□ -2.2
CKAP4Q07065 LINC01399-202ENST00000458450 244 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 SNORD65B-201ENST00000459126 73 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 AC011406.1-201ENST00000512440 370 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.31□□□□□ -2.2
CKAP4Q07065 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
CKAP4Q07065 AC005786.1-201ENST00000588553 154 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 AC006435.5-201ENST00000624486 112 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 MIR338-201ENST00000636369 67 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 Y_RNA.19-201ENST00000362462 99 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 SNORD81.1-201ENST00000363064 77 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 SNORD115-30-201ENST00000364117 82 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 Y_RNA.222-201ENST00000364264 102 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 Y_RNA.287-201ENST00000364853 94 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 RNU6-806P-201ENST00000365147 105 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 RNA5SP190-201ENST00000365222 118 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 Y_RNA.459-201ENST00000384251 102 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 AL355796.1-201ENST00000406706 323 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.3□□□□□ -2.2
CKAP4Q07065 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.3□□□□□ -2.2
CKAP4Q07065 HMGN2P34-201ENST00000437647 269 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 ATP5J2P3-201ENST00000451550 258 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 SUMO1P2-201ENST00000452524 304 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 MTATP8P1-201ENST00000467115 207 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 AC010598.1-201ENST00000510378 103 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 AP005660.1-201ENST00000522972 293 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.3□□□□□ -2.2
CKAP4Q07065 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.3□□□□□ -2.2
CKAP4Q07065 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.3□□□□□ -2.2
CKAP4Q07065 AC010900.2-201ENST00000604508 210 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 MIR376A1-201ENST00000616574 68 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 AC127459.3-201ENST00000624328 466 ntBASIC1.3□□□□□ -2.2
CKAP4Q07065 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.3□□□□□ -2.2
CKAP4Q07065 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CKAP4Q07065 snoU2-30.2-201ENST00000362805 70 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 snoU2_19.2-201ENST00000363024 80 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 SNORA72.2-201ENST00000365028 127 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 SNORA20B-201ENST00000384220 132 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 Y_RNA.581-201ENST00000391017 97 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 RPL23AP36-201ENST00000413895 458 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.29□□□□□ -2.2
CKAP4Q07065 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
CKAP4Q07065 AC005042.3-201ENST00000453230 174 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 HSPE1P25-201ENST00000455484 251 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CKAP4Q07065 SEPT14P8-201ENST00000508026 178 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 RNU6-496P-201ENST00000516145 99 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 RNU6-1146P-201ENST00000516282 102 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 SNORA40.15-201ENST00000516884 107 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.29□□□□□ -2.2
CKAP4Q07065 SNORD113-5-201ENST00000607261 78 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 AC011373.1-201ENST00000607270 237 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 AC006001.4-201ENST00000622243 395 ntBASIC1.29□□□□□ -2.2
CKAP4Q07065 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CKAP4Q07065 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CKAP4Q07065 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CKAP4Q07065 RNU6-661P-201ENST00000362409 107 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 SNORA27.1-201ENST00000362604 124 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU6-1266P-201ENST00000362794 105 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 Y_RNA.64-201ENST00000362845 102 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 SNORD113-8-201ENST00000363497 74 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 Y_RNA.574-201ENST00000384766 95 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 SNORA26.9-201ENST00000391322 122 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RPL21P38-201ENST00000418090 167 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 CST2P1-201ENST00000425770 87 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 AL121890.1-201ENST00000435457 205 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 DYNLT3P2-201ENST00000442517 295 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 MTCO2P24-201ENST00000515611 426 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU6-436P-201ENST00000516171 114 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU6-1041P-201ENST00000516254 102 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNY3P15-201ENST00000516297 97 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU6-155P-201ENST00000516347 100 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU6-635P-201ENST00000516651 102 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU7-110P-201ENST00000516891 62 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.28□□□□□ -2.2
CKAP4Q07065 AP003733.2-201ENST00000529409 171 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.2
CKAP4Q07065 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.28□□□□□ -2.2
CKAP4Q07065 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.28□□□□□ -2.2
CKAP4Q07065 AC006380.1-201ENST00000603598 186 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.28□□□□□ -2.2
CKAP4Q07065 RNU6-1309P-201ENST00000363305 108 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 Y_RNA.286-201ENST00000364813 102 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 Y_RNA.331-201ENST00000365267 102 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 RNU6-102P-201ENST00000384485 104 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 Y_RNA.518-201ENST00000384552 113 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 MIR568-201ENST00000385036 95 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 SNORA48.1-201ENST00000390879 135 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 snosnR66.1-201ENST00000391095 99 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 MIR873-201ENST00000401120 77 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms