Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 RPPH1-2P-201ENST00000516688 293 ntBASIC2.49□□□□□ -2.01
ROM1Q03395 MIR4444-1-201ENST00000581696 74 ntBASIC2.49□□□□□ -2.01
ROM1Q03395 MIR4444-2-201ENST00000584390 74 ntBASIC2.49□□□□□ -2.01
ROM1Q03395 AC022513.1-201ENST00000624512 117 ntBASIC2.49□□□□□ -2.01
ROM1Q03395 MIR3651-201ENST00000630427 90 ntBASIC2.49□□□□□ -2.01
ROM1Q03395 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ROM1Q03395 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ROM1Q03395 AC018630.2-201ENST00000534866 2403 ntBASIC2.49□□□□□ -2.01
ROM1Q03395 AC009487.2-201ENST00000420969 6821 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 AL157777.2-201ENST00000258070 137 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 RNU1-58P-201ENST00000362413 163 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 SNORD45.3-201ENST00000363836 72 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.48□□□□□ -2.01
ROM1Q03395 AL163195.1-201ENST00000496941 348 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 RNU7-121P-201ENST00000516604 62 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 SCARNA13-201ENST00000516672 275 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.48□□□□□ -2.01
ROM1Q03395 MIR2681-201ENST00000581814 105 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 Y_RNA.778-201ENST00000620203 90 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 MIR6733-201ENST00000635723 61 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 MIR3658-201ENST00000636291 56 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 ZNF271P-202ENST00000465539 1970 ntBASIC2.48□□□□□ -2.01
ROM1Q03395 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ROM1Q03395 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.47□□□□□ -2.01
ROM1Q03395 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
ROM1Q03395 SNORA71.3-201ENST00000362582 128 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 Y_RNA.400-201ENST00000383963 111 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 MIR515-2-201ENST00000384883 83 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 MIR515-1-201ENST00000384884 83 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 MIR29C-201ENST00000385231 88 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 AC018634.1-201ENST00000437554 401 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 PRSS3P4-201ENST00000453323 162 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 SNRPGP8-201ENST00000454064 226 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 SNORD11-201ENST00000459124 84 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 RPS26P45-201ENST00000471748 340 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 AC012314.7-201ENST00000619693 93 ntBASIC2.47□□□□□ -2.01
ROM1Q03395 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ROM1Q03395 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ROM1Q03395 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.47□□□□□ -2.01
ROM1Q03395 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ROM1Q03395 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
ROM1Q03395 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ROM1Q03395 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
ROM1Q03395 SNORA38.1-201ENST00000364172 131 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 MIR34B-201ENST00000385076 84 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 MIR613-201ENST00000385248 95 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 RNU11-5P-201ENST00000391216 129 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.46□□□□□ -2.02
ROM1Q03395 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.46□□□□□ -2.02
ROM1Q03395 RNU6-341P-201ENST00000516973 96 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.46□□□□□ -2.02
ROM1Q03395 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 MIR6075-201ENST00000620782 95 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 U2.22-201ENST00000636441 106 ntBASIC2.46□□□□□ -2.02
ROM1Q03395 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
ROM1Q03395 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
ROM1Q03395 Y_RNA.111-201ENST00000363248 100 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 Y_RNA.215-201ENST00000364204 112 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 Y_RNA.337-201ENST00000365312 102 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 SNORA19-201ENST00000384737 128 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 MIR597-201ENST00000384968 97 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 RNU4-43P-201ENST00000410628 137 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 RNA5SP492-201ENST00000411330 114 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 TMSB4XP3-201ENST00000445144 114 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.45□□□□□ -2.02
ROM1Q03395 RN7SL499P-201ENST00000481141 276 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 SCGB1D5P-201ENST00000515134 247 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 RNA5SP137-201ENST00000516833 135 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 AC024995.1-201ENST00000523014 93 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 ZNF861P-201ENST00000588126 639 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 DNAJC19P2-201ENST00000593340 302 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 uc_338.4-201ENST00000616635 176 ntBASIC2.45□□□□□ -2.02
ROM1Q03395 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ROM1Q03395 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ROM1Q03395 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ROM1Q03395 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ROM1Q03395 ZNF702P-202ENST00000434269 1966 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 RNA5SP374-201ENST00000362939 125 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 RNU6-704P-201ENST00000364162 103 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 Y_RNA.253-201ENST00000364562 112 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 RNU4-11P-201ENST00000365287 132 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 Y_RNA.488-201ENST00000384403 102 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.44□□□□□ -2.02
ROM1Q03395 AC023449.1-201ENST00000454464 154 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.44□□□□□ -2.02
ROM1Q03395 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.44□□□□□ -2.02
ROM1Q03395 AC005786.1-201ENST00000588553 154 ntBASIC2.44□□□□□ -2.02
ROM1Q03395 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.44□□□□□ -2.02
ROM1Q03395 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ROM1Q03395 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.44□□□□□ -2.02
ROM1Q03395 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ROM1Q03395 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ROM1Q03395 MIR422A-201ENST00000362286 90 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 SNORA1B-201ENST00000362535 133 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 RNU6-484P-201ENST00000384016 107 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 Y_RNA.432-201ENST00000384087 111 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 MIR562-201ENST00000384894 95 ntBASIC2.43□□□□□ -2.02
ROM1Q03395 RNU11-3P-201ENST00000391111 133 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms