Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU6-953P-201ENST00000459154 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AP000870.1-201ENST00000472927 406 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC010486.3-201ENST00000511602 785 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-848P-201ENST00000515948 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU4-49P-201ENST00000516080 140 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-617P-201ENST00000516147 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-473P-201ENST00000516164 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 SNORA25.14-201ENST00000516481 132 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MTND1P5-201ENST00000517906 940 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC025423.5-201ENST00000550230 219 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MTND3P19-201ENST00000603825 345 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 HULC.1-201ENST00000612720 240 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AL512427.1-201ENST00000618593 349 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR1322-201ENST00000638013 71 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC106754.1-201ENST00000562632 1513 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-527P-201ENST00000363425 104 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 SNORD114-25-201ENST00000363742 72 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-226P-201ENST00000363778 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC117470.1-201ENST00000381974 330 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-517P-201ENST00000384362 110 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-933P-201ENST00000384424 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-393P-201ENST00000384475 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR15B-201ENST00000385045 98 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 SNORD73A-201ENST00000386062 65 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR501-201ENST00000390204 84 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR1257-201ENST00000408490 117 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 SNORD83.1-201ENST00000411362 77 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC106883.1-201ENST00000418805 562 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 RPS27AP14-201ENST00000422868 454 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC012306.1-201ENST00000423267 114 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 MTND3P23-201ENST00000431980 347 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 SEPT14P24-201ENST00000447236 180 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 SNORD65B-201ENST00000459126 73 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 RPL17P19-201ENST00000489069 552 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC091959.1-201ENST00000495857 238 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC010376.1-201ENST00000522101 334 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AP001372.4-201ENST00000524889 472 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC090897.1-201ENST00000580909 226 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR4639-201ENST00000584938 69 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AC245014.2-201ENST00000603689 287 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 AL391099.1-201ENST00000624635 187 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 MIR4251-201ENST00000635819 61 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 Z97988.1-201ENST00000637697 135 ntBASIC-0.1□□□□□ -2.43
COL7A1Q02388 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-236P-201ENST00000363886 106 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-384P-201ENST00000364900 104 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR125B2-201ENST00000385128 89 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 U8.17-201ENST00000391292 132 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MTCYBP4-201ENST00000401524 249 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 FCF1P9-201ENST00000412546 282 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RPL21P38-201ENST00000418090 167 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 MTCO2P3-201ENST00000442543 421 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 GMFBP1-201ENST00000467831 427 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC114755.3-201ENST00000481111 251 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORA40.9-201ENST00000515895 93 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-436P-201ENST00000516171 114 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNA5SP268-201ENST00000516828 124 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC022878.1-201ENST00000530684 149 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MTND5P34-201ENST00000568888 325 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR548AR-201ENST00000582191 57 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC090616.2-202ENST00000584248 222 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU1-29P-201ENST00000606574 126 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC080013.3-201ENST00000606839 578 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR4791-201ENST00000607666 84 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AL096861.1-201ENST00000610899 123 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC016597.2-201ENST00000613256 341 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC027807.2-201ENST00000616099 408 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AL121895.2-201ENST00000619558 447 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 snoZ196.1-201ENST00000625269 89 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR1295B-201ENST00000636144 60 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR6828-201ENST00000636181 60 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms