Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDK3Q00526 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 Y_RNA.11-201ENST00000362375 109 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.6□□□□□ -2.15
CDK3Q00526 SNORA22B-201ENST00000383876 138 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 RNU6-505P-201ENST00000384427 107 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 Y_RNA.570-201ENST00000384750 101 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 Y_RNA.645-201ENST00000391229 102 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 HMGB3P17-201ENST00000504195 649 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 SNORA70.12-201ENST00000516084 153 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 RNA5SP458-201ENST00000516188 119 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 SNORA31.10-201ENST00000516482 106 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 Y_RNA.701-201ENST00000516812 110 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 Y_RNA.711-201ENST00000516993 102 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 Y_RNA.713-201ENST00000517013 96 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 MIR3171-201ENST00000584270 74 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.6□□□□□ -2.15
CDK3Q00526 AL021879.1-201ENST00000611756 288 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 MIR8054-201ENST00000620877 86 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
CDK3Q00526 MIR6079-201ENST00000635807 62 ntBASIC1.6□□□□□ -2.15
CDK3Q00526 SNORD114-7-201ENST00000362520 77 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 Y_RNA.143-201ENST00000363520 106 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 RNU6-450P-201ENST00000364654 107 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 Y_RNA.361-201ENST00000365515 120 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 Y_RNA.462-201ENST00000384268 102 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 RNU11-5P-201ENST00000391216 129 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 MRPL42P3-201ENST00000401492 326 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 RNU5A-5P-201ENST00000411054 116 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 RN7SKP101-201ENST00000411376 320 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AL354751.2-201ENST00000415471 210 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AL163540.1-201ENST00000485382 386 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 RNU6-63P-201ENST00000516690 95 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.59□□□□□ -2.15
CDK3Q00526 AC020661.2-201ENST00000560114 134 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.59□□□□□ -2.15
CDK3Q00526 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 MIR4423-201ENST00000580922 80 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AP000942.3-201ENST00000603702 160 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AC011373.1-201ENST00000607270 237 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 AC095038.3-201ENST00000634439 195 ntBASIC1.59□□□□□ -2.15
CDK3Q00526 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 Y_RNA.216-201ENST00000364205 93 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 Y_RNA.389-201ENST00000383924 113 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RNU6-937P-201ENST00000384325 106 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RNU6-136P-201ENST00000384663 107 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RNU6-440P-201ENST00000390882 105 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RNU6-823P-201ENST00000391042 103 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RN7SKP200-201ENST00000410564 320 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RNU6-130P-201ENST00000411112 103 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AL390729.2-201ENST00000416137 156 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AL603825.1-201ENST00000438481 80 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AC005042.3-201ENST00000453230 174 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AC091021.1-201ENST00000468051 388 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.58□□□□□ -2.16
CDK3Q00526 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
CDK3Q00526 RNU6-436P-201ENST00000516171 114 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 RNU7-110P-201ENST00000516891 62 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AC022616.4-201ENST00000522985 181 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.58□□□□□ -2.16
CDK3Q00526 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.58□□□□□ -2.16
CDK3Q00526 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.58□□□□□ -2.16
CDK3Q00526 AC104695.3-201ENST00000604052 296 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 PART1_1.1-201ENST00000611761 217 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 AC040896.1-201ENST00000613819 479 ntBASIC1.58□□□□□ -2.16
CDK3Q00526 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.58□□□□□ -2.16
CDK3Q00526 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDK3Q00526 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDK3Q00526 Y_RNA.331-201ENST00000365267 102 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 RNU6-117P-201ENST00000365415 107 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 Y_RNA.551-201ENST00000384661 102 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 RNU6-101P-201ENST00000410323 104 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 RPL23AP36-201ENST00000413895 458 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 Y_RNA.638-201ENST00000459374 113 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 RNU6-397P-201ENST00000516226 104 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 RNU6-1337P-201ENST00000516525 95 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 Y_RNA.715-201ENST00000517082 110 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 SNORA77B-201ENST00000578179 125 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
CDK3Q00526 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.57□□□□□ -2.16
CDK3Q00526 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.57□□□□□ -2.16
CDK3Q00526 Y_RNA.267-201ENST00000364679 109 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 Y_RNA.329-201ENST00000365209 107 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.56□□□□□ -2.16
CDK3Q00526 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.56□□□□□ -2.16
CDK3Q00526 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.56□□□□□ -2.16
CDK3Q00526 RNU6-1153P-201ENST00000516760 105 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 Y_RNA.721-201ENST00000517207 102 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.56□□□□□ -2.16
CDK3Q00526 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 AL356055.1-201ENST00000602528 446 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms