Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
CX3CL1P78423 snoU13.27-201ENST00000459278 104 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 AC091021.1-201ENST00000468051 388 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 RPL36AP21-201ENST00000490372 323 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.58□□□□□ -2.16
CX3CL1P78423 AC025465.3-201ENST00000510570 311 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 SNORA31.10-201ENST00000516482 106 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.58□□□□□ -2.16
CX3CL1P78423 RPL21P9-201ENST00000556149 474 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 MIR5089-201ENST00000580047 84 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 MIR4719-201ENST00000585233 84 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 DEFB117-201ENST00000602356 141 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 AC012493.3-201ENST00000604494 112 ntBASIC1.58□□□□□ -2.16
CX3CL1P78423 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CX3CL1P78423 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.58□□□□□ -2.16
CX3CL1P78423 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CX3CL1P78423 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.58□□□□□ -2.16
CX3CL1P78423 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CX3CL1P78423 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CX3CL1P78423 Y_RNA.152-201ENST00000363578 100 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 Y_RNA.172-201ENST00000363765 102 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 RNU6-770P-201ENST00000363929 105 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 RNU6-806P-201ENST00000365147 105 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
CX3CL1P78423 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 RNA5SP489-201ENST00000410986 109 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CX3CL1P78423 HSPE1P25-201ENST00000455484 251 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 LINC01399-202ENST00000458450 244 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 RPS29P21-201ENST00000496272 170 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 SEPT14P8-201ENST00000508026 178 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 MIR3145-201ENST00000580727 82 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 AC091178.2-201ENST00000584401 117 ntBASIC1.57□□□□□ -2.16
CX3CL1P78423 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CX3CL1P78423 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.57□□□□□ -2.16
CX3CL1P78423 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CX3CL1P78423 Y_RNA.19-201ENST00000362462 99 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 Y_RNA.26-201ENST00000362539 101 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 Y_RNA.383-201ENST00000383855 97 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNU6-136P-201ENST00000384663 107 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 MIR606-201ENST00000384851 96 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNU2-2P-201ENST00000410396 191 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 COX6CP10-201ENST00000416832 224 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RPL21P38-201ENST00000418090 167 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 POLR2KP2-201ENST00000438155 177 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNU7-34P-201ENST00000459394 64 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNU6-496P-201ENST00000516145 99 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNY3P15-201ENST00000516297 97 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CL1P78423 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 MIR4709-201ENST00000577272 72 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 AL929325.1-201ENST00000603096 117 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 AC004832.4-201ENST00000608952 331 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 MIR8054-201ENST00000620877 86 ntBASIC1.56□□□□□ -2.16
CX3CL1P78423 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 Y_RNA.222-201ENST00000364264 102 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 SNORA63C-201ENST00000364578 129 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CX3CL1P78423 Y_RNA.581-201ENST00000391017 97 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 RNU11-5P-201ENST00000391216 129 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 RNU6-855P-201ENST00000410395 104 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 RNA5SP511-201ENST00000410487 115 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.55□□□□□ -2.16
CX3CL1P78423 HMGN2P23-201ENST00000456759 269 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 RNU6-341P-201ENST00000516973 96 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 Y_RNA.720-201ENST00000517166 92 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.55□□□□□ -2.16
CX3CL1P78423 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CX3CL1P78423 RNU4-90P-201ENST00000362773 141 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 Y_RNA.64-201ENST00000362845 102 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 Y_RNA.267-201ENST00000364679 109 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 RNU6-950P-201ENST00000384651 107 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 MIR520G-201ENST00000385064 90 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 SNORA12.1-201ENST00000390873 148 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 RNU6-440P-201ENST00000390882 105 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 RNU6-710P-201ENST00000410424 105 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 OOSP1P1-201ENST00000423265 274 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 AL162725.1-201ENST00000435405 301 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 AL135790.2-201ENST00000437701 267 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 HSPE1P21-201ENST00000438283 308 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 AC098869.1-201ENST00000481627 292 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 AC099513.1-201ENST00000490423 301 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.54□□□□□ -2.16
CX3CL1P78423 RNU6-1291P-201ENST00000516591 104 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 RNU6-1096P-201ENST00000517089 102 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 SNRPGP19-201ENST00000603826 189 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 MIR8074-201ENST00000615081 81 ntBASIC1.54□□□□□ -2.16
CX3CL1P78423 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.54□□□□□ -2.16
CX3CL1P78423 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.54□□□□□ -2.16
CX3CL1P78423 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CX3CL1P78423 SNORA1B-201ENST00000362535 133 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 snoU2_19.2-201ENST00000363024 80 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 RNU4-80P-201ENST00000363200 141 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 Y_RNA.418-201ENST00000384029 102 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 MIR215-201ENST00000384858 110 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
CX3CL1P78423 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms