Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC092436.3-201ENST00000511788 257 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 RNU6-107P-201ENST00000516643 102 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 Vault.3-201ENST00000516676 95 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 AC138869.1-201ENST00000568623 124 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 RNU6-873P-201ENST00000363833 107 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 MIR518E-201ENST00000385252 88 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 GPR143P-201ENST00000434155 205 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 AL359672.1-201ENST00000442302 409 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 AC091179.3-201ENST00000474761 144 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 SNORA18.4-201ENST00000516440 124 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 AC087683.1-201ENST00000591187 441 ntBASIC-0.79□□□□□ -2.54
RPS28P62857 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.79□□□□□ -2.54
RPS28P62857 RNU4-21P-201ENST00000362802 126 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU4-92P-201ENST00000363783 136 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 SNORD115-8-201ENST00000363856 82 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 SNORA25.7-201ENST00000364375 127 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU4-9P-201ENST00000364951 139 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 SNORD115-38-201ENST00000365037 82 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU6-652P-201ENST00000365488 107 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 AL512326.2-201ENST00000426359 151 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.8□□□□□ -2.54
RPS28P62857 HSPE1P23-201ENST00000509838 286 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 SNORD27.1-201ENST00000516319 72 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU6-448P-201ENST00000517052 107 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.8□□□□□ -2.54
RPS28P62857 MIR4762-201ENST00000585261 75 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU1-29P-201ENST00000606574 126 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 Pinc.1-201ENST00000616452 154 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 SNORD38B-202ENST00000625943 69 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 AL162726.3-218ENST00000636401 95 ntBASIC-0.8□□□□□ -2.54
RPS28P62857 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 SNORA27.1-201ENST00000362604 124 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 RNA5SP98-201ENST00000363158 137 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 RNU6-501P-201ENST00000364072 100 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 SNORA51.10-201ENST00000384418 136 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 SNORD28B-201ENST00000390993 75 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.81□□□□□ -2.54
RPS28P62857 AL137792.2-201ENST00000443484 235 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 HMGN2P32-201ENST00000444648 269 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.81□□□□□ -2.54
RPS28P62857 RNU7-62P-201ENST00000458856 62 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 RPL23AP75-201ENST00000491601 451 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
RPS28P62857 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.81□□□□□ -2.54
RPS28P62857 AC091144.1-201ENST00000519573 138 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.81□□□□□ -2.54
RPS28P62857 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.81□□□□□ -2.54
RPS28P62857 AC006380.1-201ENST00000603598 186 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 AC127459.3-201ENST00000624328 466 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 AC106754.1-201ENST00000562632 1513 ntBASIC-0.81□□□□□ -2.54
RPS28P62857 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 RNU6-136P-201ENST00000384663 107 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 MIR570-201ENST00000384917 97 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 MIR1257-201ENST00000408490 117 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.82□□□□□ -2.54
RPS28P62857 AC092447.3-201ENST00000426027 686 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 BTF3P11-201ENST00000426582 477 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.82□□□□□ -2.54
RPS28P62857 RNU2-12P-201ENST00000517216 168 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.82□□□□□ -2.54
RPS28P62857 MIR548AR-201ENST00000582191 57 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 AL158211.2-201ENST00000607282 395 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 AL590491.3-201ENST00000610731 82 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 MTND5P32-201ENST00000560711 1802 ntBASIC-0.82□□□□□ -2.54
RPS28P62857 MIR655-201ENST00000362159 97 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 RNU6-606P-201ENST00000384721 111 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MIR489-201ENST00000384923 84 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MIR563-201ENST00000385080 79 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MIR125B2-201ENST00000385128 89 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MIR501-201ENST00000390204 84 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MTCO2P11-201ENST00000431069 680 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 SNORD45.4-201ENST00000516629 73 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.83□□□□□ -2.54
RPS28P62857 MIR3684-201ENST00000579779 74 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MIR3152-201ENST00000579801 74 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 AL109933.3-201ENST00000619095 188 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 MIR6514-201ENST00000622549 70 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 AC099654.13-201ENST00000639774 207 ntBASIC-0.83□□□□□ -2.54
RPS28P62857 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 RNU6-157P-201ENST00000383957 107 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 RNU6-811P-201ENST00000384069 107 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 RNU6-74P-201ENST00000384235 107 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 MIR23A-201ENST00000385245 73 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 SUMO1P3-201ENST00000439961 304 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 USP9YP12-201ENST00000450481 570 ntBASIC-0.84□□□□□ -2.54
RPS28P62857 GMFBP1-201ENST00000467831 427 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms