Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNU7-63P-201ENST00000459054 62 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 RPL30P10-201ENST00000488148 337 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 RPL23AP54-201ENST00000495129 419 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.29□□□□□ -2.46
AP3S2P59780 MIR548AR-201ENST00000582191 57 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 AC011458.1-201ENST00000604034 617 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 MIR8087-201ENST00000612745 78 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.29□□□□□ -2.46
AP3S2P59780 SNORD114-26-201ENST00000363543 72 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 RNU6-996P-201ENST00000365438 107 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 RNU6-716P-201ENST00000365621 103 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 MIR593-201ENST00000384856 100 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 MIR620-201ENST00000385232 95 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 SNORD100-201ENST00000408573 76 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 RNU2-54P-201ENST00000410299 190 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.3□□□□□ -2.46
AP3S2P59780 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.3□□□□□ -2.46
AP3S2P59780 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.3□□□□□ -2.46
AP3S2P59780 MTCO3P38-201ENST00000468910 766 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 SNORA40.12-201ENST00000516329 111 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 AC141557.1-201ENST00000540982 400 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.3□□□□□ -2.46
AP3S2P59780 AC011712.1-201ENST00000588959 234 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 AL133215.3-201ENST00000609801 448 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 AC103705.1-201ENST00000619013 241 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 AC022306.3-201ENST00000619930 550 ntBASIC-0.3□□□□□ -2.46
AP3S2P59780 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 RNA5SP325-201ENST00000363756 130 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 MIR145-201ENST00000384967 88 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 MIR610-201ENST00000385139 96 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 MTCYBP4-201ENST00000401524 249 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.31□□□□□ -2.46
AP3S2P59780 MTATP6P18-201ENST00000417994 673 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 Z99497.1-201ENST00000421282 135 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 AL353572.1-201ENST00000442490 417 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 SUMO1P2-201ENST00000452524 304 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 RNU7-129P-201ENST00000516128 62 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 SNORD45.4-201ENST00000516629 73 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.31□□□□□ -2.46
AP3S2P59780 MIR4424-201ENST00000585257 86 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 MIR4762-201ENST00000585261 75 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 AC008608.1-201ENST00000603910 127 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.31□□□□□ -2.46
AP3S2P59780 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
AP3S2P59780 RNU6-214P-201ENST00000384130 107 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 RNU6-790P-201ENST00000384479 105 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 MTCO2P33-201ENST00000402100 465 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 RNU2-59P-201ENST00000410482 191 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 AL354751.2-201ENST00000415471 210 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.32□□□□□ -2.46
AP3S2P59780 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.32□□□□□ -2.46
AP3S2P59780 AC073464.1-201ENST00000429823 534 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 AL358934.1-201ENST00000432346 324 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.32□□□□□ -2.46
AP3S2P59780 SNORA19.2-201ENST00000516013 114 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 AL118558.2-201ENST00000556294 238 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 PIGPP4-201ENST00000584447 307 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 MIR6755-201ENST00000619993 66 ntBASIC-0.32□□□□□ -2.46
AP3S2P59780 SNORA36.1-201ENST00000363424 132 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 U8.7-201ENST00000364940 136 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 RNU6-580P-201ENST00000365159 107 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 RNU6-929P-201ENST00000384429 107 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 RNU6-127P-201ENST00000390897 107 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP3S2P59780 RNU7-187P-201ENST00000458985 68 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP3S2P59780 AC046134.1-201ENST00000514454 666 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP3S2P59780 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP3S2P59780 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP3S2P59780 AL354950.2-201ENST00000617939 290 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 AC072046.2-201ENST00000618366 268 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 AC106754.1-201ENST00000562632 1513 ntBASIC-0.33□□□□□ -2.46
AP3S2P59780 MIR377-201ENST00000362145 69 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 MIR644A-201ENST00000385262 94 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 MIR873-201ENST00000401120 77 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 MIR938-201ENST00000401216 83 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.34□□□□□ -2.46
AP3S2P59780 MTND2P14-201ENST00000482139 351 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 AC133485.4-201ENST00000561835 220 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 MIR3913-1-201ENST00000577744 102 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 AL158063.1-201ENST00000615349 536 ntBASIC-0.34□□□□□ -2.46
AP3S2P59780 MIR522-201ENST00000385071 87 ntBASIC-0.35□□□□□ -2.47
AP3S2P59780 MT-TN-201ENST00000387400 73 ntBASIC-0.35□□□□□ -2.47
AP3S2P59780 SNORD37.1-201ENST00000390968 65 ntBASIC-0.35□□□□□ -2.47
AP3S2P59780 RNU6-248P-201ENST00000410720 107 ntBASIC-0.35□□□□□ -2.47
AP3S2P59780 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms