Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RHBDL3P58872 RNU4-79P-201ENST00000362764 141 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 Y_RNA.58-201ENST00000362807 102 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 Y_RNA.154-201ENST00000363624 102 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 Y_RNA.265-201ENST00000364677 108 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 RNY3P1-201ENST00000365085 102 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 RNY3-201ENST00000365484 102 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 AC099513.1-201ENST00000490423 301 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 SNORA40.14-201ENST00000516543 86 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 AL358944.1-201ENST00000528537 144 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 AL645939.4-201ENST00000604495 135 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 Y_RNA.772-201ENST00000606692 102 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 AC240442.1-201ENST00000616055 283 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 U6.92-201ENST00000636464 89 ntBASIC1.95□□□□□ -2.1
RHBDL3P58872 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RHBDL3P58872 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.94□□□□□ -2.1
RHBDL3P58872 RNU6-626P-201ENST00000363354 107 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 SNORD115-30-201ENST00000364117 82 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 Y_RNA.361-201ENST00000365515 120 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 RNU6-20P-201ENST00000384106 107 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.94□□□□□ -2.1
RHBDL3P58872 RPL30P13-201ENST00000418873 348 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 SNX2P2-201ENST00000424553 323 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 AC027119.1-201ENST00000440877 241 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 MIR3122-201ENST00000577243 73 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 AL390123.1-201ENST00000603216 237 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 AL606534.2-204ENST00000635008 178 ntBASIC1.94□□□□□ -2.1
RHBDL3P58872 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RHBDL3P58872 Y_RNA.197-201ENST00000364004 102 ntBASIC1.93□□□□□ -2.1
RHBDL3P58872 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.93□□□□□ -2.1
RHBDL3P58872 AC096644.2-201ENST00000429278 159 ntBASIC1.93□□□□□ -2.1
RHBDL3P58872 AL160004.2-201ENST00000432935 350 ntBASIC1.93□□□□□ -2.1
RHBDL3P58872 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.93□□□□□ -2.1
RHBDL3P58872 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.93□□□□□ -2.1
RHBDL3P58872 AL133255.1-201ENST00000606374 441 ntBASIC1.93□□□□□ -2.1
RHBDL3P58872 AL021879.1-201ENST00000611756 288 ntBASIC1.93□□□□□ -2.1
RHBDL3P58872 AC010205.1-201ENST00000616668 449 ntBASIC1.93□□□□□ -2.1
RHBDL3P58872 RNA5SP259-201ENST00000365541 109 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 RNA5SP482-201ENST00000391269 118 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 RPS20P15-201ENST00000412792 311 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 STAG3L5P-204ENST00000443759 179 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 RNU7-95P-201ENST00000459222 64 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 AC091021.1-201ENST00000468051 388 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 RN7SKP295-201ENST00000517264 153 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 AL121655.1-201ENST00000605811 308 ntBASIC1.92□□□□□ -2.1
RHBDL3P58872 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RHBDL3P58872 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RHBDL3P58872 RNU6-117P-201ENST00000365415 107 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 AL031003.1-201ENST00000404229 172 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 RNA5SP247-201ENST00000411181 105 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDL3P58872 AC093852.1-201ENST00000503587 266 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 RNU6-475P-201ENST00000516073 104 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 RAB11AP2-201ENST00000545905 639 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 AC091178.2-201ENST00000584401 117 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 MIR4781-201ENST00000585250 76 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.91□□□□□ -2.1
RHBDL3P58872 Y_RNA.267-201ENST00000364679 109 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 RNU6-60P-201ENST00000364792 103 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.9□□□□□ -2.11
RHBDL3P58872 RNU6-505P-201ENST00000384427 107 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 Y_RNA.579-201ENST00000390939 94 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 RNU6-321P-201ENST00000410912 106 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 RNU5A-5P-201ENST00000411054 116 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 RN7SKP101-201ENST00000411376 320 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
RHBDL3P58872 RNU6-155P-201ENST00000516347 100 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 AP001485.1-201ENST00000604799 199 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 PRR13P7-201ENST00000605538 430 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 SNORD3E-202ENST00000627253 216 ntBASIC1.9□□□□□ -2.11
RHBDL3P58872 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RHBDL3P58872 Y_RNA.5-201ENST00000362334 102 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 Y_RNA.112-201ENST00000363250 102 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 Y_RNA.124-201ENST00000363339 93 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 RNU1-42P-201ENST00000364033 160 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 Y_RNA.462-201ENST00000384268 102 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 Y_RNA.496-201ENST00000384444 101 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 MIR1323-201ENST00000408090 73 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 CHEK2P4-201ENST00000450340 246 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 RNU4-77P-201ENST00000516692 156 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 MIR5188-201ENST00000583467 113 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 AL117336.2-201ENST00000602435 335 ntBASIC1.89□□□□□ -2.11
RHBDL3P58872 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RHBDL3P58872 Y_RNA.101-201ENST00000363154 102 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 RNU6-324P-201ENST00000363957 106 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 RNU4-13P-201ENST00000364019 141 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 Y_RNA.446-201ENST00000384178 104 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 MIR660-201ENST00000385235 97 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 RNU6-710P-201ENST00000410424 105 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.88□□□□□ -2.11
RHBDL3P58872 AC005042.3-201ENST00000453230 174 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 RPL30P7-201ENST00000479312 323 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 RNU6-1096P-201ENST00000517089 102 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 AL359821.1-201ENST00000605519 182 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 AL080274.1-201ENST00000605565 220 ntBASIC1.88□□□□□ -2.11
RHBDL3P58872 AC022441.3-201ENST00000605737 136 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms