Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU6-1041P-201ENST00000516254 102 ntBASIC2.02□□□□□ -2.09
HDAC4P56524 RNU6-1146P-201ENST00000516282 102 ntBASIC2.02□□□□□ -2.09
HDAC4P56524 AP003733.2-201ENST00000529409 171 ntBASIC2.02□□□□□ -2.09
HDAC4P56524 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC4P56524 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.02□□□□□ -2.09
HDAC4P56524 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.02□□□□□ -2.09
HDAC4P56524 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
HDAC4P56524 AL162730.1-201ENST00000605734 292 ntBASIC2.02□□□□□ -2.09
HDAC4P56524 AL353149.1-201ENST00000610667 244 ntBASIC2.02□□□□□ -2.09
HDAC4P56524 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.02□□□□□ -2.09
HDAC4P56524 MIR338-201ENST00000636369 67 ntBASIC2.02□□□□□ -2.09
HDAC4P56524 RNU6-238P-201ENST00000363313 106 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 SNORA33-201ENST00000363664 130 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 RNU6-1240P-201ENST00000365155 104 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 SNORA20B-201ENST00000384220 132 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 RNU6-472P-201ENST00000384299 107 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 SNORA8-201ENST00000384574 139 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 MIR1253-201ENST00000408273 105 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 RNA5SP501-201ENST00000410990 112 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 MTCYBP9-201ENST00000431021 303 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 RNU6-436P-201ENST00000516171 114 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
HDAC4P56524 AL161670.1-201ENST00000554348 137 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 MIR3684-201ENST00000579779 74 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 AC011373.1-201ENST00000607270 237 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 AC127459.3-201ENST00000624328 466 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
HDAC4P56524 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HDAC4P56524 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
HDAC4P56524 Y_RNA.124-201ENST00000363339 93 ntBASIC2□□□□□ -2.09
HDAC4P56524 SNORA72.2-201ENST00000365028 127 ntBASIC2□□□□□ -2.09
HDAC4P56524 Y_RNA.541-201ENST00000384640 113 ntBASIC2□□□□□ -2.09
HDAC4P56524 MT-TW-201ENST00000387382 68 ntBASIC2□□□□□ -2.09
HDAC4P56524 Y_RNA.602-201ENST00000410535 92 ntBASIC2□□□□□ -2.09
HDAC4P56524 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2□□□□□ -2.09
HDAC4P56524 RNU6-155P-201ENST00000516347 100 ntBASIC2□□□□□ -2.09
HDAC4P56524 RNU7-110P-201ENST00000516891 62 ntBASIC2□□□□□ -2.09
HDAC4P56524 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2□□□□□ -2.09
HDAC4P56524 TTK-211ENST00000627129 240 ntTSL 5 BASIC2□□□□□ -2.09
HDAC4P56524 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
HDAC4P56524 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HDAC4P56524 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
HDAC4P56524 Y_RNA.84-201ENST00000363011 104 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 Y_RNA.331-201ENST00000365267 102 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 Y_RNA.376-201ENST00000365638 108 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HDAC4P56524 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 AL031003.1-201ENST00000404229 172 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC4P56524 AC005042.3-201ENST00000453230 174 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 RNU7-128P-201ENST00000517247 62 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 MIR8062-201ENST00000621515 85 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
HDAC4P56524 U6.108-201ENST00000637764 58 ntBASIC1.99□□□□□ -2.09
HDAC4P56524 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.99□□□□□ -2.09
HDAC4P56524 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HDAC4P56524 Y_RNA.16-201ENST00000362421 102 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 SNORA27.1-201ENST00000362604 124 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 RNU6-862P-201ENST00000362804 105 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 Y_RNA.796-201ENST00000364268 102 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 Y_RNA.799-201ENST00000364992 102 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 Y_RNA.396-201ENST00000383949 103 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 Y_RNA.466-201ENST00000384294 113 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HDAC4P56524 AC010598.1-201ENST00000510378 103 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 RNU6-1143P-201ENST00000516125 104 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 RNVU1-2-201ENST00000516326 135 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 AC027419.1-201ENST00000522976 328 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.98□□□□□ -2.09
HDAC4P56524 SNORD113-5-201ENST00000607261 78 ntBASIC1.98□□□□□ -2.09
HDAC4P56524 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
HDAC4P56524 Y_RNA.176-201ENST00000363815 109 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 Y_RNA.329-201ENST00000365209 107 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 Y_RNA.418-201ENST00000384029 102 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 RNU6-574P-201ENST00000384265 107 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 Y_RNA.483-201ENST00000384380 101 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 RNU6-1203P-201ENST00000410703 110 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 RNU2-61P-201ENST00000411069 191 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 AL390729.2-201ENST00000416137 156 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 CST2P1-201ENST00000425770 87 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 SEPT14P8-201ENST00000508026 178 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 RNU6-570P-201ENST00000517051 105 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.97□□□□□ -2.09
HDAC4P56524 MIR3145-201ENST00000580727 82 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
HDAC4P56524 DEFB117-201ENST00000602356 141 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 AC069114.2-201ENST00000604699 304 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 AP001282.2-201ENST00000616149 309 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 AC006435.5-201ENST00000624486 112 ntBASIC1.97□□□□□ -2.09
HDAC4P56524 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
HDAC4P56524 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
HDAC4P56524 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 Y_RNA.149-201ENST00000363558 117 ntBASIC1.96□□□□□ -2.1
HDAC4P56524 Y_RNA.172-201ENST00000363765 102 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms