Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.7□□□□□ -1.98
GFRA1P56159 AL049873.1-201ENST00000480540 376 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 SNORD116-25-201ENST00000516517 92 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 SNORA31.26-201ENST00000517250 137 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
GFRA1P56159 AC091178.2-201ENST00000584401 117 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.7□□□□□ -1.98
GFRA1P56159 AC007318.2-201ENST00000620999 243 ntBASIC2.7□□□□□ -1.98
GFRA1P56159 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.69□□□□□ -1.98
GFRA1P56159 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 SNORA33-201ENST00000363664 130 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 Y_RNA.215-201ENST00000364204 112 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 Y_RNA.267-201ENST00000364679 109 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 RNU2-55P-201ENST00000411146 174 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.69□□□□□ -1.98
GFRA1P56159 RNU6-1291P-201ENST00000516591 104 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 RNU6-341P-201ENST00000516973 96 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 AL031274.2-201ENST00000599419 203 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 AC012640.5-201ENST00000623897 319 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 U6.108-201ENST00000637764 58 ntBASIC2.69□□□□□ -1.98
GFRA1P56159 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
GFRA1P56159 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
GFRA1P56159 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
GFRA1P56159 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 RNU1-58P-201ENST00000362413 163 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 RNU1-35P-201ENST00000362782 153 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 RNU6-199P-201ENST00000362954 107 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 Y_RNA.111-201ENST00000363248 100 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 RNU6-1209P-201ENST00000363655 107 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 Y_RNA.796-201ENST00000364268 102 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 Y_RNA.799-201ENST00000364992 102 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 Y_RNA.432-201ENST00000384087 111 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 Y_RNA.521-201ENST00000384560 114 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 RNA5SP274-201ENST00000410484 108 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.68□□□□□ -1.98
GFRA1P56159 RPS26P45-201ENST00000471748 340 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 EIF4BP1-201ENST00000554881 351 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 AC022202.1-201ENST00000613515 211 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 uc_338.4-201ENST00000616635 176 ntBASIC2.68□□□□□ -1.98
GFRA1P56159 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.68□□□□□ -1.98
GFRA1P56159 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.68□□□□□ -1.98
GFRA1P56159 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GFRA1P56159 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.67□□□□□ -1.98
GFRA1P56159 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
GFRA1P56159 RNU4-11P-201ENST00000365287 132 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 RNU6-851P-201ENST00000384565 107 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 SNORD37.2-201ENST00000391075 66 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 SNRPGP8-201ENST00000454064 226 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 SNORD11-201ENST00000459124 84 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 RNA5SP385-201ENST00000515947 110 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 RNU6-1299P-201ENST00000516316 100 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 RNA5SP137-201ENST00000516833 135 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 AL358944.1-201ENST00000528537 144 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.67□□□□□ -1.98
GFRA1P56159 AC005786.1-201ENST00000588553 154 ntBASIC2.67□□□□□ -1.98
GFRA1P56159 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
GFRA1P56159 SNORA46-201ENST00000384762 135 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 MIR513C-201ENST00000401352 84 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.66□□□□□ -1.98
GFRA1P56159 AC022018.1-201ENST00000430685 241 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 AC107083.1-201ENST00000439643 279 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 RPS27P1-201ENST00000450552 247 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 HMGN1P7-201ENST00000491722 313 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 AL163195.1-201ENST00000496941 348 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 AC107016.2-201ENST00000547968 190 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 MIR548X2-201ENST00000579776 100 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
GFRA1P56159 AC096644.4-201ENST00000563417 2912 ntBASIC2.66□□□□□ -1.98
GFRA1P56159 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
GFRA1P56159 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.65□□□□□ -1.98
GFRA1P56159 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
GFRA1P56159 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
GFRA1P56159 SNORA9.2-201ENST00000365361 133 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 Y_RNA.497-201ENST00000384447 98 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 SNORD77.4-201ENST00000516158 81 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 RNU6-197P-201ENST00000516680 100 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 RNU6-126P-201ENST00000516685 103 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.65□□□□□ -1.99
GFRA1P56159 AC245166.1-201ENST00000521012 253 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 AP002004.2-201ENST00000531656 154 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.65□□□□□ -1.99
GFRA1P56159 AL033523.1-201ENST00000605153 153 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.65□□□□□ -1.99
GFRA1P56159 MIR3658-201ENST00000636291 56 ntBASIC2.65□□□□□ -1.99
GFRA1P56159 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
GFRA1P56159 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.64□□□□□ -1.99
GFRA1P56159 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
GFRA1P56159 RNU6-484P-201ENST00000384016 107 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 SNORA26-201ENST00000391286 122 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 RNU2-70P-201ENST00000410718 179 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 RNA5SP492-201ENST00000411330 114 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 COTL1P1-201ENST00000422309 375 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 BX510359.4-201ENST00000423750 193 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 SNRPGP10-201ENST00000432323 225 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 AC099677.2-201ENST00000436385 175 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms