Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH11P55287 RNU1-22P-201ENST00000363334 158 ntBASIC1.69□□□□□ -2.14
CDH11P55287 Y_RNA.152-201ENST00000363578 100 ntBASIC1.69□□□□□ -2.14
CDH11P55287 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
CDH11P55287 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
CDH11P55287 RNU6-1019P-201ENST00000364424 107 ntBASIC1.69□□□□□ -2.14
CDH11P55287 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
CDH11P55287 Y_RNA.331-201ENST00000365267 102 ntBASIC1.69□□□□□ -2.14
CDH11P55287 MIR215-201ENST00000384858 110 ntBASIC1.69□□□□□ -2.14
CDH11P55287 MIR515-2-201ENST00000384883 83 ntBASIC1.69□□□□□ -2.14
CDH11P55287 MIR515-1-201ENST00000384884 83 ntBASIC1.69□□□□□ -2.14
CDH11P55287 U8.13-201ENST00000390842 128 ntBASIC1.69□□□□□ -2.14
CDH11P55287 Y_RNA.581-201ENST00000391017 97 ntBASIC1.69□□□□□ -2.14
CDH11P55287 RPL23AP36-201ENST00000413895 458 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AC009310.1-201ENST00000414414 451 ntBASIC1.69□□□□□ -2.14
CDH11P55287 EBAG9P1-201ENST00000418955 543 ntBASIC1.69□□□□□ -2.14
CDH11P55287 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH11P55287 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH11P55287 AC010409.1-201ENST00000487382 476 ntBASIC1.69□□□□□ -2.14
CDH11P55287 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CDH11P55287 AC097462.1-201ENST00000514125 324 ntBASIC1.69□□□□□ -2.14
CDH11P55287 RNA5SP20-201ENST00000515976 84 ntBASIC1.69□□□□□ -2.14
CDH11P55287 RNU7-110P-201ENST00000516891 62 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH11P55287 AC027419.1-201ENST00000522976 328 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AC024995.1-201ENST00000523014 93 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AC023157.2-201ENST00000540596 141 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AC084364.2-201ENST00000546924 395 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AC022254.1-201ENST00000567857 235 ntBASIC1.69□□□□□ -2.14
CDH11P55287 AC006380.1-201ENST00000603598 186 ntBASIC1.69□□□□□ -2.14
CDH11P55287 PRR13P7-201ENST00000605538 430 ntBASIC1.69□□□□□ -2.14
CDH11P55287 SNORD113-5-201ENST00000607261 78 ntBASIC1.69□□□□□ -2.14
CDH11P55287 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
CDH11P55287 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH11P55287 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDH11P55287 Y_RNA.133-201ENST00000363428 110 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RNU6-482P-201ENST00000391068 107 ntBASIC1.68□□□□□ -2.14
CDH11P55287 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.68□□□□□ -2.14
CDH11P55287 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH11P55287 AL118496.2-201ENST00000448300 230 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RPS27P1-201ENST00000450552 247 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RPS26P55-201ENST00000471178 356 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RPL23AP63-201ENST00000498752 471 ntBASIC1.68□□□□□ -2.14
CDH11P55287 SEPT14P8-201ENST00000508026 178 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RNU6-1143P-201ENST00000516125 104 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RNU7-99P-201ENST00000516271 62 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RNY3P15-201ENST00000516297 97 ntBASIC1.68□□□□□ -2.14
CDH11P55287 SNORA40.15-201ENST00000516884 107 ntBASIC1.68□□□□□ -2.14
CDH11P55287 MIR4287-201ENST00000579398 78 ntBASIC1.68□□□□□ -2.14
CDH11P55287 MIR4438-201ENST00000585271 93 ntBASIC1.68□□□□□ -2.14
CDH11P55287 AL773524.1-201ENST00000614065 229 ntBASIC1.68□□□□□ -2.14
CDH11P55287 RNU6-271P-201ENST00000363858 105 ntBASIC1.67□□□□□ -2.14
CDH11P55287 RNA5SP99-201ENST00000364020 114 ntBASIC1.67□□□□□ -2.14
CDH11P55287 Y_RNA.329-201ENST00000365209 107 ntBASIC1.67□□□□□ -2.14
CDH11P55287 RNU6-1105P-201ENST00000384774 107 ntBASIC1.67□□□□□ -2.14
CDH11P55287 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
CDH11P55287 DYNLT3P2-201ENST00000442517 295 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AL606517.2-201ENST00000442855 241 ntBASIC1.67□□□□□ -2.14
CDH11P55287 HSPE1P13-201ENST00000451143 297 ntBASIC1.67□□□□□ -2.14
CDH11P55287 RPS27P22-201ENST00000478056 241 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AL163195.1-201ENST00000496941 348 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.67□□□□□ -2.14
CDH11P55287 RNU6-1045P-201ENST00000516321 107 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AP003733.2-201ENST00000529409 171 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.67□□□□□ -2.14
CDH11P55287 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.67□□□□□ -2.14
CDH11P55287 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
CDH11P55287 AC005034.5-201ENST00000604219 466 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AC069114.2-201ENST00000604699 304 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
CDH11P55287 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
CDH11P55287 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.67□□□□□ -2.14
CDH11P55287 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.67□□□□□ -2.14
CDH11P55287 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CDH11P55287 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CDH11P55287 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CDH11P55287 Y_RNA.172-201ENST00000363765 102 ntBASIC1.66□□□□□ -2.14
CDH11P55287 Y_RNA.418-201ENST00000384029 102 ntBASIC1.66□□□□□ -2.14
CDH11P55287 RNU6-505P-201ENST00000384427 107 ntBASIC1.66□□□□□ -2.14
CDH11P55287 Y_RNA.512-201ENST00000384518 102 ntBASIC1.66□□□□□ -2.14
CDH11P55287 RNA5SP212-201ENST00000391223 107 ntBASIC1.66□□□□□ -2.14
CDH11P55287 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
CDH11P55287 AC010615.1-201ENST00000594254 1764 ntBASIC1.66□□□□□ -2.14
CDH11P55287 Y_RNA.84-201ENST00000363011 104 ntBASIC1.65□□□□□ -2.15
CDH11P55287 RNU6-407P-201ENST00000365280 104 ntBASIC1.65□□□□□ -2.15
CDH11P55287 Y_RNA.383-201ENST00000383855 97 ntBASIC1.65□□□□□ -2.15
CDH11P55287 Y_RNA.541-201ENST00000384640 113 ntBASIC1.65□□□□□ -2.15
CDH11P55287 RNU6-21P-201ENST00000384710 107 ntBASIC1.65□□□□□ -2.15
CDH11P55287 MIR568-201ENST00000385036 95 ntBASIC1.65□□□□□ -2.15
CDH11P55287 SNORA40.18-201ENST00000391200 128 ntBASIC1.65□□□□□ -2.15
CDH11P55287 Y_RNA.602-201ENST00000410535 92 ntBASIC1.65□□□□□ -2.15
CDH11P55287 AC244636.1-201ENST00000421152 228 ntBASIC1.65□□□□□ -2.15
CDH11P55287 AL135790.2-201ENST00000437701 267 ntBASIC1.65□□□□□ -2.15
CDH11P55287 HMGN2P23-201ENST00000456759 269 ntBASIC1.65□□□□□ -2.15
CDH11P55287 HMGN1P10-201ENST00000474557 553 ntBASIC1.65□□□□□ -2.15
CDH11P55287 RNU6-1337P-201ENST00000516525 95 ntBASIC1.65□□□□□ -2.15
CDH11P55287 RNU6-635P-201ENST00000516651 102 ntBASIC1.65□□□□□ -2.15
CDH11P55287 RNU1-142P-201ENST00000516682 145 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms