Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
NEK3P51956 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.05□□□□□ -2.08
NEK3P51956 AP002004.2-201ENST00000531656 154 ntBASIC2.05□□□□□ -2.08
NEK3P51956 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
NEK3P51956 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
NEK3P51956 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
NEK3P51956 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NEK3P51956 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NEK3P51956 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NEK3P51956 WWP1P1-201ENST00000466609 2769 ntBASIC2.04□□□□□ -2.08
NEK3P51956 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.04□□□□□ -2.08
NEK3P51956 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NEK3P51956 RNU6-439P-201ENST00000384188 106 ntBASIC2.04□□□□□ -2.08
NEK3P51956 RNU6-937P-201ENST00000384325 106 ntBASIC2.04□□□□□ -2.08
NEK3P51956 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
NEK3P51956 MIR1289-2-201ENST00000408360 111 ntBASIC2.04□□□□□ -2.08
NEK3P51956 AL139156.1-201ENST00000412785 841 ntBASIC2.04□□□□□ -2.08
NEK3P51956 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.04□□□□□ -2.08
NEK3P51956 AL162725.1-201ENST00000435405 301 ntBASIC2.04□□□□□ -2.08
NEK3P51956 snoU13.9-201ENST00000458927 103 ntBASIC2.04□□□□□ -2.08
NEK3P51956 RNU7-34P-201ENST00000459394 64 ntBASIC2.04□□□□□ -2.08
NEK3P51956 RNU6-1143P-201ENST00000516125 104 ntBASIC2.04□□□□□ -2.08
NEK3P51956 RNU6-1337P-201ENST00000516525 95 ntBASIC2.04□□□□□ -2.08
NEK3P51956 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.04□□□□□ -2.08
NEK3P51956 MIR4680-201ENST00000580906 66 ntBASIC2.04□□□□□ -2.08
NEK3P51956 MIR3124-201ENST00000582636 67 ntBASIC2.04□□□□□ -2.08
NEK3P51956 MIR7843-201ENST00000622274 79 ntBASIC2.04□□□□□ -2.08
NEK3P51956 RNU6-1123P-201ENST00000362347 106 ntBASIC2.03□□□□□ -2.08
NEK3P51956 SNORA4.2-201ENST00000365313 147 ntBASIC2.03□□□□□ -2.08
NEK3P51956 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.03□□□□□ -2.08
NEK3P51956 RNU6-1031P-201ENST00000384773 107 ntBASIC2.03□□□□□ -2.08
NEK3P51956 RNU6-1248P-201ENST00000391096 64 ntBASIC2.03□□□□□ -2.08
NEK3P51956 RNU2-2P-201ENST00000410396 191 ntBASIC2.03□□□□□ -2.08
NEK3P51956 AL161935.2-201ENST00000414627 60 ntBASIC2.03□□□□□ -2.08
NEK3P51956 U8.19-201ENST00000459095 133 ntBASIC2.03□□□□□ -2.08
NEK3P51956 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.03□□□□□ -2.08
NEK3P51956 SNORA31.10-201ENST00000516482 106 ntBASIC2.03□□□□□ -2.08
NEK3P51956 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.03□□□□□ -2.08
NEK3P51956 SNORA77B-201ENST00000578179 125 ntBASIC2.03□□□□□ -2.08
NEK3P51956 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NEK3P51956 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
NEK3P51956 Y_RNA.329-201ENST00000365209 107 ntBASIC2.02□□□□□ -2.09
NEK3P51956 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
NEK3P51956 AC091021.1-201ENST00000468051 388 ntBASIC2.02□□□□□ -2.09
NEK3P51956 HMGB3P17-201ENST00000504195 649 ntBASIC2.02□□□□□ -2.09
NEK3P51956 RNU6-897P-201ENST00000517135 105 ntBASIC2.02□□□□□ -2.09
NEK3P51956 AC113195.1-201ENST00000579952 141 ntBASIC2.02□□□□□ -2.09
NEK3P51956 AL929325.1-201ENST00000603096 117 ntBASIC2.02□□□□□ -2.09
NEK3P51956 RAC1P9-201ENST00000604990 392 ntBASIC2.02□□□□□ -2.09
NEK3P51956 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.02□□□□□ -2.09
NEK3P51956 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.02□□□□□ -2.09
NEK3P51956 MIR376A1-201ENST00000616574 68 ntBASIC2.02□□□□□ -2.09
NEK3P51956 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NEK3P51956 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
NEK3P51956 SNORD33-201ENST00000362761 85 ntBASIC2.01□□□□□ -2.09
NEK3P51956 Y_RNA.216-201ENST00000364205 93 ntBASIC2.01□□□□□ -2.09
NEK3P51956 RNU6-450P-201ENST00000364654 107 ntBASIC2.01□□□□□ -2.09
NEK3P51956 MIR194-1-201ENST00000384892 85 ntBASIC2.01□□□□□ -2.09
NEK3P51956 SNORD115-46-201ENST00000390982 71 ntBASIC2.01□□□□□ -2.09
NEK3P51956 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
NEK3P51956 PGBD4P5-201ENST00000445958 426 ntBASIC2.01□□□□□ -2.09
NEK3P51956 RNU2-56P-201ENST00000516826 190 ntBASIC2.01□□□□□ -2.09
NEK3P51956 SNORA40.15-201ENST00000516884 107 ntBASIC2.01□□□□□ -2.09
NEK3P51956 MIR4300-201ENST00000581016 96 ntBASIC2.01□□□□□ -2.09
NEK3P51956 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.01□□□□□ -2.09
NEK3P51956 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NEK3P51956 AC100821.1-201ENST00000523153 2479 ntBASIC2□□□□□ -2.09
NEK3P51956 MIR424-201ENST00000362227 98 ntBASIC2□□□□□ -2.09
NEK3P51956 HSPE1P21-201ENST00000438283 308 ntBASIC2□□□□□ -2.09
NEK3P51956 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2□□□□□ -2.09
NEK3P51956 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
NEK3P51956 RNU6-966P-201ENST00000516479 104 ntBASIC2□□□□□ -2.09
NEK3P51956 RNU6-1096P-201ENST00000517089 102 ntBASIC2□□□□□ -2.09
NEK3P51956 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2□□□□□ -2.09
NEK3P51956 AC015720.1-201ENST00000565251 277 ntBASIC2□□□□□ -2.09
NEK3P51956 AC136932.1-201ENST00000574771 208 ntBASIC2□□□□□ -2.09
NEK3P51956 AL513423.1-201ENST00000621695 132 ntBASIC2□□□□□ -2.09
NEK3P51956 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2□□□□□ -2.09
NEK3P51956 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2□□□□□ -2.09
NEK3P51956 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
NEK3P51956 SNORD81.1-201ENST00000363064 77 ntBASIC1.99□□□□□ -2.09
NEK3P51956 RNU4-13P-201ENST00000364019 141 ntBASIC1.99□□□□□ -2.09
NEK3P51956 Y_RNA.456-201ENST00000384232 111 ntBASIC1.99□□□□□ -2.09
NEK3P51956 RNA5SP482-201ENST00000391269 118 ntBASIC1.99□□□□□ -2.09
NEK3P51956 RNU6-985P-201ENST00000410182 104 ntBASIC1.99□□□□□ -2.09
NEK3P51956 RPL30P13-201ENST00000418873 348 ntBASIC1.99□□□□□ -2.09
NEK3P51956 POLR2KP2-201ENST00000438155 177 ntBASIC1.99□□□□□ -2.09
NEK3P51956 MTND4LP30-201ENST00000454092 297 ntBASIC1.99□□□□□ -2.09
NEK3P51956 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
NEK3P51956 MIR4422-201ENST00000581938 83 ntBASIC1.99□□□□□ -2.09
NEK3P51956 AC021506.2-201ENST00000612354 169 ntBASIC1.99□□□□□ -2.09
NEK3P51956 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
NEK3P51956 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.99□□□□□ -2.09
NEK3P51956 RNU4-90P-201ENST00000362773 141 ntBASIC1.98□□□□□ -2.09
NEK3P51956 SNORA63-201ENST00000363450 132 ntBASIC1.98□□□□□ -2.09
NEK3P51956 Y_RNA.222-201ENST00000364264 102 ntBASIC1.98□□□□□ -2.09
NEK3P51956 Y_RNA.368-201ENST00000365547 113 ntBASIC1.98□□□□□ -2.09
NEK3P51956 RNU6-338P-201ENST00000383888 105 ntBASIC1.98□□□□□ -2.09
NEK3P51956 Y_RNA.527-201ENST00000384573 102 ntBASIC1.98□□□□□ -2.09
NEK3P51956 RNU6-1011P-201ENST00000384668 107 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms