Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 MIR1185-2-201ENST00000408687 86 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 AC008134.1-201ENST00000420943 193 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 AC005042.3-201ENST00000453230 174 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 RPL39P38-201ENST00000467018 153 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 SERF1AP1-201ENST00000514575 187 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 DEFB108E-201ENST00000524692 240 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 MIR3128-201ENST00000581957 66 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLCN3P51790 AL391987.6-201ENST00000305671 199 ntBASIC2□□□□□ -2.09
CLCN3P51790 Y_RNA.60-201ENST00000362831 98 ntBASIC2□□□□□ -2.09
CLCN3P51790 SNORA16B-201ENST00000364674 135 ntBASIC2□□□□□ -2.09
CLCN3P51790 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
CLCN3P51790 Y_RNA.416-201ENST00000384014 113 ntBASIC2□□□□□ -2.09
CLCN3P51790 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
CLCN3P51790 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
CLCN3P51790 AC108059.2-201ENST00000434626 151 ntBASIC2□□□□□ -2.09
CLCN3P51790 RPL23AP3-201ENST00000453844 468 ntBASIC2□□□□□ -2.09
CLCN3P51790 MTND4LP30-201ENST00000454092 297 ntBASIC2□□□□□ -2.09
CLCN3P51790 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
CLCN3P51790 SUMO2P18-201ENST00000518873 252 ntBASIC2□□□□□ -2.09
CLCN3P51790 TP73-AS1.1-201ENST00000611447 161 ntBASIC2□□□□□ -2.09
CLCN3P51790 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CLCN3P51790 SNORD115-30-201ENST00000364117 82 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 Y_RNA.352-201ENST00000365439 102 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 Y_RNA.478-201ENST00000384358 107 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 AL627390.1-201ENST00000396055 340 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 AL512604.1-201ENST00000404812 257 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 AC016717.1-201ENST00000448918 286 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 ATP5J2P3-201ENST00000451550 258 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 RNU6-1146P-201ENST00000516282 102 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 RNU7-110P-201ENST00000516891 62 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 MIR3684-201ENST00000579779 74 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 AC008749.1-201ENST00000597650 306 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 AC010900.2-201ENST00000604508 210 ntBASIC1.99□□□□□ -2.09
CLCN3P51790 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
CLCN3P51790 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
CLCN3P51790 UBE2WP1-201ENST00000362030 340 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 RNY1-201ENST00000364228 113 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 Y_RNA.331-201ENST00000365267 102 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 Y_RNA.476-201ENST00000384347 108 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CLCN3P51790 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 MIR548H3-201ENST00000408771 118 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 RNU6-57P-201ENST00000411348 103 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 RPL23AP36-201ENST00000413895 458 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CLCN3P51790 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 MTCO1P5-201ENST00000433573 344 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 AL603825.1-201ENST00000438481 80 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCN3P51790 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCN3P51790 RNU6-436P-201ENST00000516171 114 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCN3P51790 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCN3P51790 U2.14-201ENST00000615943 113 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 U6.115-201ENST00000636045 103 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.98□□□□□ -2.09
CLCN3P51790 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CLCN3P51790 AL596028.1-201ENST00000326971 197 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 RNA5SP190-201ENST00000365222 118 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 RNU6-1318P-201ENST00000365389 103 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 Y_RNA.383-201ENST00000383855 97 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 Y_RNA.489-201ENST00000384410 101 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 RNU6-21P-201ENST00000384710 107 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 Y_RNA.569-201ENST00000384749 103 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 RNU6-907P-201ENST00000390924 102 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AL603910.2-201ENST00000407268 136 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AC060773.1-201ENST00000421698 310 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AC107393.1-201ENST00000512403 346 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AC011406.1-201ENST00000512440 370 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 RNU2-31P-201ENST00000516954 155 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 RNU6-250P-201ENST00000516958 103 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AC025647.1-201ENST00000517879 253 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 MIR4643-201ENST00000577473 78 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
CLCN3P51790 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
CLCN3P51790 SNORD114-7-201ENST00000362520 77 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 RNU6-1240P-201ENST00000365155 104 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 RNA5SP475-201ENST00000410568 110 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 RNU2-14P-201ENST00000411053 191 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 RNU6-847P-201ENST00000411115 108 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.96□□□□□ -2.1
CLCN3P51790 MRPS10P1-201ENST00000448483 130 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 SNORD13-201ENST00000459299 104 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 Y_RNA.673-201ENST00000516306 88 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 AP005660.1-201ENST00000522972 293 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
CLCN3P51790 AC005357.1-201ENST00000588399 301 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.96□□□□□ -2.1
CLCN3P51790 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
CLCN3P51790 RNU6-1266P-201ENST00000362794 105 ntBASIC1.95□□□□□ -2.1
CLCN3P51790 Y_RNA.140-201ENST00000363474 103 ntBASIC1.95□□□□□ -2.1
CLCN3P51790 Y_RNA.217-201ENST00000364214 105 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms