Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRIM1P49642 ZNF271P-202ENST00000465539 1970 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 MIR302B-201ENST00000362188 73 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 RNA5SP295-201ENST00000362655 121 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 RNU6-546P-201ENST00000383991 107 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 AC123900.1-201ENST00000420390 96 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 RN7SKP12-201ENST00000516275 143 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 AC004486.1-201ENST00000546846 233 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 SNORD115-40-201ENST00000606510 82 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.35□□□□□ -1.71
PRIM1P49642 MIR7157-201ENST00000635801 60 ntBASIC4.35□□□□□ -1.71
PRIM1P49642 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRIM1P49642 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRIM1P49642 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRIM1P49642 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRIM1P49642 MIR590-201ENST00000385008 97 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 MICF-203ENST00000432679 129 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 HMGN2P7-201ENST00000456186 273 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.34□□□□□ -1.71
PRIM1P49642 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.34□□□□□ -1.71
PRIM1P49642 RNY4P20-201ENST00000516678 93 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 RNU6-341P-201ENST00000516973 96 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 MIR4778-201ENST00000577635 80 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 MIR4672-201ENST00000583126 81 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 AC012531.5-201ENST00000611375 151 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 MIR7106-201ENST00000612419 65 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.34□□□□□ -1.71
PRIM1P49642 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.34□□□□□ -1.72
PRIM1P49642 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.34□□□□□ -1.72
PRIM1P49642 ZNF720P1-201ENST00000562403 1939 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRIM1P49642 SNORA5B-201ENST00000363786 132 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 RNU6-1189P-201ENST00000383958 107 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 MIR548A2-201ENST00000384956 97 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.33□□□□□ -1.72
PRIM1P49642 NDUFB9P3-201ENST00000521269 501 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.33□□□□□ -1.72
PRIM1P49642 MIR4425-201ENST00000580572 84 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 AC062037.1-201ENST00000605302 128 ntBASIC4.33□□□□□ -1.72
PRIM1P49642 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PRIM1P49642 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRIM1P49642 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRIM1P49642 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
PRIM1P49642 RNA5SP173-201ENST00000364857 136 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 MIR488-201ENST00000365739 83 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 AC233266.1-201ENST00000454518 96 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 RNU6-904P-201ENST00000516206 101 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 AC026333.2-201ENST00000542164 106 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 MIR3163-201ENST00000581592 73 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 AC006023.1-201ENST00000603944 259 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 AC242852.1-201ENST00000612151 96 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 AC244015.1-201ENST00000622301 99 ntBASIC4.32□□□□□ -1.72
PRIM1P49642 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
PRIM1P49642 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRIM1P49642 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PRIM1P49642 SNORA2.2-201ENST00000365473 135 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRIM1P49642 MIR518F-201ENST00000384973 87 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 MIR1912-201ENST00000410389 80 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 FTH1P12-201ENST00000432137 551 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 HMGN2P34-201ENST00000437647 269 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 AC107083.1-201ENST00000439643 279 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 AL031183.1-201ENST00000457667 207 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 CYP2C59P-201ENST00000457790 269 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 RNU7-94P-201ENST00000459576 63 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 RN7SL863P-201ENST00000462370 296 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.31□□□□□ -1.72
PRIM1P49642 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.31□□□□□ -1.72
PRIM1P49642 AC021443.1-201ENST00000604478 211 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 CEP170P1-201ENST00000502249 4587 ntBASIC4.31□□□□□ -1.72
PRIM1P49642 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.31□□□□□ -1.72
PRIM1P49642 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRIM1P49642 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.3□□□□□ -1.72
PRIM1P49642 Y_RNA.332-201ENST00000365271 113 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 RNU6-301P-201ENST00000384277 107 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PRIM1P49642 AP000567.1-201ENST00000406413 156 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 RNU2-32P-201ENST00000411193 191 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 AC093259.1-201ENST00000509755 300 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 MALAT1.1-201ENST00000618249 95 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 MIR5739-201ENST00000619803 80 ntBASIC4.3□□□□□ -1.72
PRIM1P49642 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRIM1P49642 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRIM1P49642 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.3□□□□□ -1.72
PRIM1P49642 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRIM1P49642 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PRIM1P49642 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PRIM1P49642 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRIM1P49642 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRIM1P49642 MIR126-201ENST00000362291 85 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 Y_RNA.219-201ENST00000364232 113 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 RNU4-36P-201ENST00000364294 144 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 RNA5SP126-201ENST00000365092 109 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRIM1P49642 U8.17-201ENST00000391292 132 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 RNU6-1186P-201ENST00000410429 97 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 RNU7-170P-201ENST00000459303 61 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.29□□□□□ -1.72
PRIM1P49642 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms