Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA4P43681 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA4P43681 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNA4P43681 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.86
CHRNA4P43681 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNA4P43681 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.4□□□□□ -1.86
CHRNA4P43681 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.4□□□□□ -1.86
CHRNA4P43681 Y_RNA.190-201ENST00000363964 101 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 RNA5SP72-201ENST00000364442 117 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 Y_RNA.454-201ENST00000384224 113 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 RNU1-57P-201ENST00000384491 166 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 Y_RNA.507-201ENST00000384500 99 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 Y_RNA.531-201ENST00000384589 121 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 MIR591-201ENST00000385290 95 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA4P43681 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA4P43681 MIR548Z-201ENST00000584743 97 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 HMGN2P15-201ENST00000585707 270 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 AC008739.2-201ENST00000597006 317 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA4P43681 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNA4P43681 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA4P43681 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA4P43681 AL356274.2-201ENST00000624379 3752 ntBASIC3.4□□□□□ -1.87
CHRNA4P43681 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNA4P43681 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA4P43681 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA4P43681 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA4P43681 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA4P43681 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA4P43681 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA4P43681 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHRNA4P43681 RNA5SP295-201ENST00000362655 121 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 RNU6-60P-201ENST00000364792 103 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 RNU6-652P-201ENST00000365488 107 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA4P43681 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA4P43681 MIR4298-201ENST00000584380 73 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 AC008507.4-201ENST00000585464 127 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
CHRNA4P43681 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CHRNA4P43681 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNA4P43681 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CHRNA4P43681 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA4P43681 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CHRNA4P43681 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 SNORA2.2-201ENST00000365473 135 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 Y_RNA.360-201ENST00000365512 102 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 Y_RNA.410-201ENST00000383992 113 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 RN7SKP111-201ENST00000410349 271 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 AL513477.1-202ENST00000417061 214 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 AC016717.1-201ENST00000448918 286 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 HMGN2P16-201ENST00000456802 261 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 RNU7-14P-201ENST00000459331 62 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 RN7SL293P-201ENST00000481765 281 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 RNU7-6P-201ENST00000516845 62 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 RNU7-172P-201ENST00000517125 64 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 MIR4668-201ENST00000582284 70 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 MIR4777-201ENST00000583710 86 ntBASIC3.38□□□□□ -1.87
CHRNA4P43681 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA4P43681 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
CHRNA4P43681 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA4P43681 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
CHRNA4P43681 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA4P43681 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA4P43681 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA4P43681 TNPO1P3-201ENST00000436471 2662 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA4P43681 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA4P43681 RNA5SP50-201ENST00000363731 107 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 Y_RNA.242-201ENST00000364473 110 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 SNORD38C-201ENST00000384381 69 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 MIR889-201ENST00000401280 79 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 AC023141.4-201ENST00000412031 328 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 AC016909.1-201ENST00000415916 166 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 RN7SL330P-201ENST00000469709 307 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA4P43681 RNU6-1231P-201ENST00000517185 103 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 MIR3683-201ENST00000580847 82 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 MIR4305-201ENST00000583252 102 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA4P43681 AC073308.1-201ENST00000623696 305 ntBASIC3.37□□□□□ -1.87
CHRNA4P43681 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA4P43681 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA4P43681 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHRNA4P43681 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 SNORD115-19-201ENST00000363098 82 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 SNORD115-18-201ENST00000363293 82 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 SNORD115-17-201ENST00000364612 82 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHRNA4P43681 NDUFB4P4-201ENST00000404822 243 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 Y_RNA.607-201ENST00000410597 98 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 RNU2-49P-201ENST00000410666 184 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA4P43681 AC010099.1-201ENST00000455434 375 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms