Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL137792.2-201ENST00000443484 235 ntBASIC0.87□□□□□ -2.27
RORAP35398 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.87□□□□□ -2.27
RORAP35398 RNU7-87P-201ENST00000459343 62 ntBASIC0.87□□□□□ -2.27
RORAP35398 RPL7P42-201ENST00000481005 679 ntBASIC0.87□□□□□ -2.27
RORAP35398 RNU6-1291P-201ENST00000516591 104 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC090049.2-201ENST00000550377 109 ntBASIC0.87□□□□□ -2.27
RORAP35398 RPL21P9-201ENST00000556149 474 ntBASIC0.87□□□□□ -2.27
RORAP35398 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
RORAP35398 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.87□□□□□ -2.27
RORAP35398 AL117336.2-201ENST00000602435 335 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC009229.3-201ENST00000608056 282 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC007014.2-201ENST00000615581 479 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC022709.1-201ENST00000615967 87 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
RORAP35398 AC002553.4-201ENST00000616896 331 ntBASIC0.87□□□□□ -2.27
RORAP35398 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
RORAP35398 Y_RNA.2-201ENST00000362330 96 ntBASIC0.86□□□□□ -2.27
RORAP35398 RNU4-79P-201ENST00000362764 141 ntBASIC0.86□□□□□ -2.27
RORAP35398 Y_RNA.267-201ENST00000364679 109 ntBASIC0.86□□□□□ -2.27
RORAP35398 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
RORAP35398 RNU6-910P-201ENST00000390844 107 ntBASIC0.86□□□□□ -2.27
RORAP35398 MTND3P8-201ENST00000412909 339 ntBASIC0.86□□□□□ -2.27
RORAP35398 AC245047.7-201ENST00000440265 293 ntBASIC0.86□□□□□ -2.27
RORAP35398 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
RORAP35398 MTND3P10-201ENST00000450967 341 ntBASIC0.86□□□□□ -2.27
RORAP35398 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.86□□□□□ -2.27
RORAP35398 AC074133.1-201ENST00000515696 183 ntBASIC0.86□□□□□ -2.27
RORAP35398 RNU2-56P-201ENST00000516826 190 ntBASIC0.86□□□□□ -2.27
RORAP35398 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
RORAP35398 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.86□□□□□ -2.27
RORAP35398 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.86□□□□□ -2.27
RORAP35398 MIR3684-201ENST00000579779 74 ntBASIC0.86□□□□□ -2.27
RORAP35398 Y_RNA.88-201ENST00000363029 99 ntBASIC0.85□□□□□ -2.27
RORAP35398 RNU6-879P-201ENST00000364328 108 ntBASIC0.85□□□□□ -2.27
RORAP35398 RNU6-593P-201ENST00000364716 112 ntBASIC0.85□□□□□ -2.27
RORAP35398 Y_RNA.354-201ENST00000365448 111 ntBASIC0.85□□□□□ -2.27
RORAP35398 Y_RNA.358-201ENST00000365491 99 ntBASIC0.85□□□□□ -2.27
RORAP35398 MIR562-201ENST00000384894 95 ntBASIC0.85□□□□□ -2.27
RORAP35398 RNU6-700P-201ENST00000391043 107 ntBASIC0.85□□□□□ -2.27
RORAP35398 RNU6-510P-201ENST00000391239 108 ntBASIC0.85□□□□□ -2.27
RORAP35398 MTCYBP10-201ENST00000424905 650 ntBASIC0.85□□□□□ -2.27
RORAP35398 RPS4XP11-201ENST00000446897 772 ntBASIC0.85□□□□□ -2.27
RORAP35398 PCNPP5-201ENST00000452246 481 ntBASIC0.85□□□□□ -2.27
RORAP35398 RPS26P48-201ENST00000491713 339 ntBASIC0.85□□□□□ -2.27
RORAP35398 AF235103.2-201ENST00000525753 346 ntBASIC0.85□□□□□ -2.27
RORAP35398 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
RORAP35398 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
RORAP35398 Y_RNA.361-201ENST00000365515 120 ntBASIC0.84□□□□□ -2.27
RORAP35398 RNU6-601P-201ENST00000384540 107 ntBASIC0.84□□□□□ -2.27
RORAP35398 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
RORAP35398 MIR873-201ENST00000401120 77 ntBASIC0.84□□□□□ -2.27
RORAP35398 MTCYBP4-201ENST00000401524 249 ntBASIC0.84□□□□□ -2.27
RORAP35398 AL451046.2-201ENST00000403074 277 ntBASIC0.84□□□□□ -2.27
RORAP35398 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
RORAP35398 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.84□□□□□ -2.27
RORAP35398 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.84□□□□□ -2.27
RORAP35398 Z98949.2-201ENST00000440996 144 ntBASIC0.84□□□□□ -2.27
RORAP35398 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.84□□□□□ -2.27
RORAP35398 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.84□□□□□ -2.27
RORAP35398 snoU13.25-201ENST00000458945 104 ntBASIC0.84□□□□□ -2.27
RORAP35398 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
RORAP35398 SNORA40.9-201ENST00000515895 93 ntBASIC0.84□□□□□ -2.27
RORAP35398 Y_RNA.655-201ENST00000515919 96 ntBASIC0.84□□□□□ -2.27
RORAP35398 RNU6-322P-201ENST00000516010 103 ntBASIC0.84□□□□□ -2.27
RORAP35398 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
RORAP35398 RNU7-28P-201ENST00000516759 62 ntBASIC0.84□□□□□ -2.27
RORAP35398 Y_RNA.708-201ENST00000516950 96 ntBASIC0.84□□□□□ -2.27
RORAP35398 RNU6-1116P-201ENST00000517269 99 ntBASIC0.84□□□□□ -2.27
RORAP35398 AC022868.1-201ENST00000517767 391 ntBASIC0.84□□□□□ -2.27
RORAP35398 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.84□□□□□ -2.27
RORAP35398 AP002004.2-201ENST00000531656 154 ntBASIC0.84□□□□□ -2.27
RORAP35398 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.84□□□□□ -2.27
RORAP35398 AC084782.3-201ENST00000612282 578 ntBASIC0.84□□□□□ -2.27
RORAP35398 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.84□□□□□ -2.27
RORAP35398 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.84□□□□□ -2.28
RORAP35398 RNU4-41P-201ENST00000364426 143 ntBASIC0.83□□□□□ -2.28
RORAP35398 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
RORAP35398 SNORA2.2-201ENST00000365473 135 ntBASIC0.83□□□□□ -2.28
RORAP35398 RNU6-376P-201ENST00000384731 106 ntBASIC0.83□□□□□ -2.28
RORAP35398 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
RORAP35398 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
RORAP35398 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
RORAP35398 RNU6-63P-201ENST00000516690 95 ntBASIC0.83□□□□□ -2.28
RORAP35398 AC060780.3-201ENST00000589464 80 ntBASIC0.83□□□□□ -2.28
RORAP35398 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
RORAP35398 AC073869.6-201ENST00000640656 341 ntBASIC0.83□□□□□ -2.28
RORAP35398 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RORAP35398 Y_RNA.6-201ENST00000362350 114 ntBASIC0.82□□□□□ -2.28
RORAP35398 RNU6-1301P-201ENST00000362724 104 ntBASIC0.82□□□□□ -2.28
RORAP35398 Y_RNA.243-201ENST00000364481 109 ntBASIC0.82□□□□□ -2.28
RORAP35398 Y_RNA.482-201ENST00000384377 111 ntBASIC0.82□□□□□ -2.28
RORAP35398 Y_RNA.498-201ENST00000384460 102 ntBASIC0.82□□□□□ -2.28
RORAP35398 SNORD12-201ENST00000391002 90 ntBASIC0.82□□□□□ -2.28
RORAP35398 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
RORAP35398 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.82□□□□□ -2.28
RORAP35398 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
RORAP35398 SNORD124-201ENST00000459577 104 ntBASIC0.82□□□□□ -2.28
RORAP35398 AL049830.1-201ENST00000468034 425 ntBASIC0.82□□□□□ -2.28
RORAP35398 RNU7-12P-201ENST00000516030 62 ntBASIC0.82□□□□□ -2.28
RORAP35398 RNU6-1278P-201ENST00000516130 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms