Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RNU6-625P-201ENST00000459412 107 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 MTND4P17-201ENST00000470444 350 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 SNORA40.9-201ENST00000515895 93 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 AC022868.1-201ENST00000517767 391 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 AC136932.1-201ENST00000574771 208 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CTNNA1P35221 RNU6-1301P-201ENST00000362724 104 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 Y_RNA.361-201ENST00000365515 120 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 MIR520G-201ENST00000385064 90 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 RNU6-370P-201ENST00000411008 104 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.12□□□□□ -2.23
CTNNA1P35221 AC104332.1-201ENST00000440471 797 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 RBMX2P4-201ENST00000441256 376 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 SNORA20.3-201ENST00000516880 132 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 AP002001.1-203ENST00000534002 267 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 AC016727.1-205ENST00000605437 569 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 MIR3674-201ENST00000636576 68 ntBASIC1.12□□□□□ -2.23
CTNNA1P35221 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CTNNA1P35221 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CTNNA1P35221 Y_RNA.474-201ENST00000384341 102 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 MIR625-201ENST00000385047 85 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 RPL23AP50-201ENST00000434149 455 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.11□□□□□ -2.23
CTNNA1P35221 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
CTNNA1P35221 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 RNU6-1213P-201ENST00000517075 94 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 AC104984.5-201ENST00000586878 94 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 AL117336.2-201ENST00000602435 335 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 MIR1244-1-201ENST00000612829 85 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 AC025253.1-201ENST00000613623 543 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 MIR1244-3-201ENST00000635744 85 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 U6.115-201ENST00000636045 103 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 MIR1244-2-201ENST00000636449 85 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 MIR1244-4-202ENST00000636813 85 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 AC099654.14-201ENST00000638599 341 ntBASIC1.11□□□□□ -2.23
CTNNA1P35221 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.11□□□□□ -2.23
CTNNA1P35221 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CTNNA1P35221 RNU6-99P-201ENST00000364721 107 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 RNU6-310P-201ENST00000384655 107 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 Y_RNA.646-201ENST00000410980 101 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 AP1B1P2-201ENST00000416196 106 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.1□□□□□ -2.23
CTNNA1P35221 POLR2J4-204ENST00000418424 324 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
CTNNA1P35221 AC233266.1-201ENST00000454518 96 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 MIR2053-201ENST00000459295 91 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 PRDX4P1-201ENST00000507189 574 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 MIR5690-201ENST00000583739 73 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 AC242852.1-201ENST00000612151 96 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 AC244015.1-201ENST00000622301 99 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 AC127459.3-201ENST00000624328 466 ntBASIC1.1□□□□□ -2.23
CTNNA1P35221 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.23
CTNNA1P35221 RNU6-454P-201ENST00000364292 107 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 Y_RNA.243-201ENST00000364481 109 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 RNU6-117P-201ENST00000365415 107 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 RNU6-1310P-201ENST00000384153 107 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 Y_RNA.592-201ENST00000410274 109 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 SNORD12B-201ENST00000410433 91 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 RNA5SP475-201ENST00000410568 110 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 RNU5A-5P-201ENST00000411054 116 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AC138393.2-201ENST00000414742 246 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AC114482.1-201ENST00000418010 247 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.09□□□□□ -2.23
CTNNA1P35221 MTND4P28-201ENST00000426217 387 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AC098614.3-201ENST00000438957 440 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AL049830.1-201ENST00000468034 425 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.09□□□□□ -2.23
CTNNA1P35221 SNORD111.1-201ENST00000516421 86 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 RNU7-4P-201ENST00000516961 62 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 RNU6-1096P-201ENST00000517089 102 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AL358944.1-201ENST00000528537 144 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AC113139.1-201ENST00000605049 239 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AC087588.2-201ENST00000617667 426 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 AL359757.2-201ENST00000624309 274 ntBASIC1.09□□□□□ -2.23
CTNNA1P35221 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CTNNA1P35221 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 MIRLET7C-201ENST00000362160 84 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 Y_RNA.124-201ENST00000363339 93 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 Y_RNA.363-201ENST00000365529 113 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 SNORA69.1-201ENST00000390904 137 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 RNU6-482P-201ENST00000391068 107 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
CTNNA1P35221 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 LINC01399-202ENST00000458450 244 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 AP000942.3-201ENST00000603702 160 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 AL355073.2-201ENST00000612106 557 ntBASIC1.08□□□□□ -2.24
CTNNA1P35221 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CTNNA1P35221 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
CTNNA1P35221 RNU6-890P-201ENST00000384121 107 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms