Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-355P-201ENST00000410427 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-791P-201ENST00000410467 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-705P-201ENST00000410601 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-860P-201ENST00000410860 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-785P-201ENST00000411324 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-195P-201ENST00000411352 109 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.58□□□□□ -2.5
SDC4P31431 SNRPGP10-201ENST00000432323 225 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.58□□□□□ -2.5
SDC4P31431 SNORD45.4-201ENST00000516629 73 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 UBL5P4-201ENST00000562584 236 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 AC018714.1-201ENST00000605028 208 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 AC246785.4-201ENST00000605374 287 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU1-29P-201ENST00000606574 126 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 U6.90-201ENST00000614007 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 U6.70-201ENST00000620287 104 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 AC010608.3-201ENST00000625048 527 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 SNORD115-8-201ENST00000363856 82 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 RNU4-9P-201ENST00000364951 139 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 SNORD115-38-201ENST00000365037 82 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 MIR125B2-201ENST00000385128 89 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
SDC4P31431 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 RNU7-138P-201ENST00000459479 64 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 RNU6-107P-201ENST00000516643 102 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 Vault.3-201ENST00000516676 95 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 RNU6-448P-201ENST00000517052 107 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 RNU7-156P-201ENST00000517214 74 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.59□□□□□ -2.5
SDC4P31431 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.59□□□□□ -2.5
SDC4P31431 AC138869.1-201ENST00000568623 124 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 AP000753.3-201ENST00000604083 169 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 AC022306.3-201ENST00000619930 550 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 MTND1P7-201ENST00000632801 297 ntBASIC-0.59□□□□□ -2.5
SDC4P31431 RNU6-83P-201ENST00000384568 112 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 MIR802-201ENST00000390235 94 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 SNORA26.5-201ENST00000391215 123 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 RNU4-30P-201ENST00000410245 143 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 MLLT10P1-201ENST00000418346 262 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.6□□□□□ -2.51
SDC4P31431 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 GPR143P-201ENST00000434155 205 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 RNU6-329P-201ENST00000459618 107 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 AC091959.1-201ENST00000495857 238 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 PRDX4P1-201ENST00000507189 574 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 SNORD92-201ENST00000585078 85 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 Z84480.1-201ENST00000605131 311 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 AC006157.1-201ENST00000611750 366 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 AC127459.3-201ENST00000624328 466 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.6□□□□□ -2.51
SDC4P31431 AC010332.2-201ENST00000613083 1904 ntBASIC-0.6□□□□□ -2.51
SDC4P31431 SNORA72.1-201ENST00000363485 129 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 RNU6-501P-201ENST00000364072 100 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 RNU6-784P-201ENST00000384330 106 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 MIR522-201ENST00000385071 87 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 AL512326.2-201ENST00000426359 151 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 USP9YP12-201ENST00000450481 570 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 ZNF114P1-201ENST00000453500 292 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.61□□□□□ -2.51
SDC4P31431 RNU7-62P-201ENST00000458856 62 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 SNORA18.4-201ENST00000516440 124 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 IGLVI-20-201ENST00000519296 130 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 AC022878.1-201ENST00000530684 149 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.61□□□□□ -2.51
SDC4P31431 AC018448.1-201ENST00000552843 316 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 SCOCP1-201ENST00000554676 349 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.61□□□□□ -2.51
SDC4P31431 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.61□□□□□ -2.51
SDC4P31431 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.61□□□□□ -2.51
SDC4P31431 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 AL138960.2-201ENST00000625145 535 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 MIR6828-201ENST00000636181 60 ntBASIC-0.61□□□□□ -2.51
SDC4P31431 SNORD50B-201ENST00000364995 70 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 MIR521-1-201ENST00000384902 87 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.62□□□□□ -2.51
SDC4P31431 AC087499.4-201ENST00000448505 178 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 U8.21-201ENST00000459536 136 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.62□□□□□ -2.51
SDC4P31431 MIR4264-201ENST00000583520 66 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 AL136370.1-201ENST00000608166 691 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 MIR6740-201ENST00000618268 113 ntBASIC-0.62□□□□□ -2.51
SDC4P31431 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.62□□□□□ -2.51
SDC4P31431 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 SNORD114-31-201ENST00000363219 75 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 SNORD14C-201ENST00000365382 88 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 SNORA51.10-201ENST00000384418 136 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
SDC4P31431 RNA5SP300-201ENST00000391197 107 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 268.5 ms