Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU7-172P-201ENST00000517125 64 ntBASIC2.58□□□□□ -2
CNGA1P29973 DEFB108E-201ENST00000524692 240 ntBASIC2.58□□□□□ -2
CNGA1P29973 U4.1-201ENST00000620349 87 ntBASIC2.58□□□□□ -2
CNGA1P29973 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CNGA1P29973 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.57□□□□□ -2
CNGA1P29973 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.57□□□□□ -2
CNGA1P29973 Y_RNA.452-201ENST00000384202 108 ntBASIC2.57□□□□□ -2
CNGA1P29973 MIR221-201ENST00000385135 110 ntBASIC2.57□□□□□ -2
CNGA1P29973 RNU6-1186P-201ENST00000410429 97 ntBASIC2.57□□□□□ -2
CNGA1P29973 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.57□□□□□ -2
CNGA1P29973 AC245047.4-201ENST00000433189 144 ntBASIC2.57□□□□□ -2
CNGA1P29973 HMGN2P23-201ENST00000456759 269 ntBASIC2.57□□□□□ -2
CNGA1P29973 AC010409.1-201ENST00000487382 476 ntBASIC2.57□□□□□ -2
CNGA1P29973 SERF1AP1-201ENST00000514575 187 ntBASIC2.57□□□□□ -2
CNGA1P29973 RNU1-142P-201ENST00000516682 145 ntBASIC2.57□□□□□ -2
CNGA1P29973 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.57□□□□□ -2
CNGA1P29973 SUB1P4-201ENST00000566062 339 ntBASIC2.57□□□□□ -2
CNGA1P29973 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CNGA1P29973 Y_RNA.140-201ENST00000363474 103 ntBASIC2.56□□□□□ -2
CNGA1P29973 RNU6-1019P-201ENST00000364424 107 ntBASIC2.56□□□□□ -2
CNGA1P29973 Y_RNA.237-201ENST00000364439 102 ntBASIC2.56□□□□□ -2
CNGA1P29973 RNU6-574P-201ENST00000384265 107 ntBASIC2.56□□□□□ -2
CNGA1P29973 RNU6-1248P-201ENST00000391096 64 ntBASIC2.56□□□□□ -2
CNGA1P29973 RNU6-1278P-201ENST00000516130 107 ntBASIC2.56□□□□□ -2
CNGA1P29973 RNU6-191P-201ENST00000516295 94 ntBASIC2.56□□□□□ -2
CNGA1P29973 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
CNGA1P29973 MIR5007-201ENST00000583098 95 ntBASIC2.56□□□□□ -2
CNGA1P29973 AC037487.3-201ENST00000606668 112 ntBASIC2.56□□□□□ -2
CNGA1P29973 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CNGA1P29973 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
CNGA1P29973 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
CNGA1P29973 AL391987.6-201ENST00000305671 199 ntBASIC2.55□□□□□ -2
CNGA1P29973 Y_RNA.288-201ENST00000364854 92 ntBASIC2.55□□□□□ -2
CNGA1P29973 Y_RNA.368-201ENST00000365547 113 ntBASIC2.55□□□□□ -2
CNGA1P29973 SNORA8-201ENST00000384574 139 ntBASIC2.55□□□□□ -2
CNGA1P29973 RNA5SP323-201ENST00000391094 133 ntBASIC2.55□□□□□ -2
CNGA1P29973 AL135790.2-201ENST00000437701 267 ntBASIC2.55□□□□□ -2
CNGA1P29973 MIR3149-201ENST00000584629 83 ntBASIC2.55□□□□□ -2
CNGA1P29973 MIR6895-201ENST00000613497 78 ntBASIC2.55□□□□□ -2
CNGA1P29973 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.55□□□□□ -2
CNGA1P29973 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CNGA1P29973 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
CNGA1P29973 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.54□□□□□ -2
CNGA1P29973 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.54□□□□□ -2
CNGA1P29973 SNORA25.1-201ENST00000362326 128 ntBASIC2.54□□□□□ -2
CNGA1P29973 Y_RNA.172-201ENST00000363765 102 ntBASIC2.54□□□□□ -2
CNGA1P29973 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.54□□□□□ -2
CNGA1P29973 RNU6-855P-201ENST00000410395 104 ntBASIC2.54□□□□□ -2
CNGA1P29973 AL163195.1-201ENST00000496941 348 ntBASIC2.54□□□□□ -2
CNGA1P29973 AC084364.2-201ENST00000546924 395 ntBASIC2.54□□□□□ -2
CNGA1P29973 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
CNGA1P29973 ZNF702P-202ENST00000434269 1966 ntBASIC2.54□□□□□ -2
CNGA1P29973 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CNGA1P29973 Y_RNA.193-201ENST00000363979 102 ntBASIC2.53□□□□□ -2
CNGA1P29973 Y_RNA.238-201ENST00000364441 102 ntBASIC2.53□□□□□ -2
CNGA1P29973 RNU6-702P-201ENST00000364982 107 ntBASIC2.53□□□□□ -2
CNGA1P29973 Y_RNA.310-201ENST00000365063 113 ntBASIC2.53□□□□□ -2
CNGA1P29973 Y_RNA.456-201ENST00000384232 111 ntBASIC2.53□□□□□ -2
CNGA1P29973 SNORD116-13-201ENST00000384408 92 ntBASIC2.53□□□□□ -2
CNGA1P29973 AL023284.1-201ENST00000403956 276 ntBASIC2.53□□□□□ -2
CNGA1P29973 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.53□□□□□ -2
CNGA1P29973 SNORD127-201ENST00000458892 86 ntBASIC2.53□□□□□ -2
CNGA1P29973 RPL36AP21-201ENST00000490372 323 ntBASIC2.53□□□□□ -2
CNGA1P29973 AC091959.1-201ENST00000495857 238 ntBASIC2.53□□□□□ -2
CNGA1P29973 RNU6-63P-201ENST00000516690 95 ntBASIC2.53□□□□□ -2
CNGA1P29973 SCARNA24.2-201ENST00000516968 130 ntBASIC2.53□□□□□ -2
CNGA1P29973 MIR5694-201ENST00000581190 76 ntBASIC2.53□□□□□ -2
CNGA1P29973 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
CNGA1P29973 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.53□□□□□ -2
CNGA1P29973 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
CNGA1P29973 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CNGA1P29973 AC008555.8-201ENST00000623602 2168 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 Y_RNA.341-201ENST00000365341 102 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 RNU6-514P-201ENST00000384208 107 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 RNA5SP100-201ENST00000410903 110 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 RNA5SP59-201ENST00000410922 110 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 AL158823.1-201ENST00000418441 478 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 RPS20P10-201ENST00000451209 253 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 AC121758.2-201ENST00000553271 193 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 RPL21P9-201ENST00000556149 474 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 AC004817.2-201ENST00000561794 651 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 AC004832.4-201ENST00000608952 331 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.52□□□□□ -2.01
CNGA1P29973 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CNGA1P29973 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CNGA1P29973 RNA5SP276-201ENST00000362580 94 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 RNU6-112P-201ENST00000363599 104 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 SNORA63D-201ENST00000364359 132 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 Y_RNA.338-201ENST00000365320 114 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 RNU6-376P-201ENST00000384731 106 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 AL512604.1-201ENST00000404812 257 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 RNU2-38P-201ENST00000410856 79 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CNGA1P29973 AC069257.2-201ENST00000441819 155 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.51□□□□□ -2.01
CNGA1P29973 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms