Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SNORD1A-201ENST00000364968 72 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 Y_RNA.463-201ENST00000384271 102 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 RNY3P4-201ENST00000384428 101 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
COL8A2P25067 RNA5SP475-201ENST00000410568 110 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.87□□□□□ -2.27
COL8A2P25067 AF228730.4-201ENST00000421457 183 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 RAB28P5-201ENST00000427490 651 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 FTH1P12-201ENST00000432137 551 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.87□□□□□ -2.27
COL8A2P25067 FCF1P4-201ENST00000448326 183 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 SNORD65B-201ENST00000459126 73 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 AC079140.2-201ENST00000506193 142 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 RNU6-911P-201ENST00000516523 104 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.87□□□□□ -2.27
COL8A2P25067 AL442163.3-201ENST00000554110 156 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 MIR3674-201ENST00000636576 68 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
COL8A2P25067 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
COL8A2P25067 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.87□□□□□ -2.27
COL8A2P25067 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
COL8A2P25067 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
COL8A2P25067 RNU6-1115P-201ENST00000362490 106 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RNU4-79P-201ENST00000362764 141 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 Y_RNA.315-201ENST00000365117 102 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RNU6-926P-201ENST00000384075 107 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RNU6-1310P-201ENST00000384153 107 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 MIR222-201ENST00000384992 110 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RNU6-360P-201ENST00000390944 104 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 SNORD78.2-201ENST00000391076 69 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RNU6-1186P-201ENST00000410429 97 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 COX6CP10-201ENST00000416832 224 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.86□□□□□ -2.27
COL8A2P25067 AC073910.1-201ENST00000445047 438 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 MRPS10P1-201ENST00000448483 130 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC245517.4-201ENST00000448601 281 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.86□□□□□ -2.27
COL8A2P25067 RPS26P45-201ENST00000471748 340 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RPS27P22-201ENST00000478056 241 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC010469.2-201ENST00000496412 480 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AL163195.1-201ENST00000496941 348 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 Y_RNA.661-201ENST00000516003 99 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 RNU6-976P-201ENST00000516086 111 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC027419.1-201ENST00000522976 328 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.86□□□□□ -2.27
COL8A2P25067 RAB11AP2-201ENST00000545905 639 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.86□□□□□ -2.27
COL8A2P25067 AC019288.1-201ENST00000557918 224 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC006600.1-201ENST00000572529 153 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 MIR3937-201ENST00000580135 106 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 MIR4438-201ENST00000585271 93 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 VN1R91P-201ENST00000594377 169 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 U6.73-201ENST00000619194 103 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC138305.3-201ENST00000624988 240 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC095038.3-201ENST00000634439 195 ntBASIC0.86□□□□□ -2.27
COL8A2P25067 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.86□□□□□ -2.27
COL8A2P25067 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
COL8A2P25067 Y_RNA.39-201ENST00000362620 98 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 Y_RNA.116-201ENST00000363292 103 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 Y_RNA.252-201ENST00000364556 101 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RNU5E-4P-201ENST00000364931 120 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 SNORA20B-201ENST00000384220 132 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RNU6-950P-201ENST00000384651 107 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RPL21P1-201ENST00000399532 476 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 MTCO3P19-201ENST00000415864 321 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RPS27P16-201ENST00000425758 201 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 AC096644.2-201ENST00000429278 159 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 SUMO1P2-201ENST00000452524 304 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 snoU13.27-201ENST00000459278 104 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RNU6-408P-201ENST00000515910 100 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RNU7-99P-201ENST00000516271 62 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 RNU6-113P-201ENST00000516653 101 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.85□□□□□ -2.27
COL8A2P25067 AC023157.2-201ENST00000540596 141 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.85□□□□□ -2.27
COL8A2P25067 AL117336.2-201ENST00000602435 335 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 AL078604.3-201ENST00000615580 211 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 AL138825.1-201ENST00000618587 192 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 MIR4272-201ENST00000635924 64 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 U6.108-201ENST00000637764 58 ntBASIC0.85□□□□□ -2.27
COL8A2P25067 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
COL8A2P25067 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
COL8A2P25067 MIR302D-201ENST00000362275 68 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 Y_RNA.27-201ENST00000362540 103 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 Y_RNA.796-201ENST00000364268 102 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 SNORA25.8-201ENST00000364831 128 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 RNU6-867P-201ENST00000364956 107 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 Y_RNA.799-201ENST00000364992 102 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 RNU1-115P-201ENST00000365329 160 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 Y_RNA.355-201ENST00000365462 98 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 Y_RNA.431-201ENST00000384086 102 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 Y_RNA.579-201ENST00000390939 94 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 RNA5SP109-201ENST00000391010 116 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 MRPL35P1-201ENST00000404272 572 ntBASIC0.84□□□□□ -2.27
COL8A2P25067 AL355796.1-201ENST00000406706 323 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms