Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 MIR521-1-201ENST00000384902 87 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 RNU6-903P-201ENST00000391270 109 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 AC015818.7-201ENST00000428754 109 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.29□□□□□ -2.46
HLA-EP13747 AC087499.7-201ENST00000441958 109 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 AL359672.1-201ENST00000442302 409 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 RPS29P8-201ENST00000445109 171 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
HLA-EP13747 SNORA40.12-201ENST00000516329 111 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.29□□□□□ -2.46
HLA-EP13747 MIR4771-2-201ENST00000577758 74 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 MIR4771-1-201ENST00000582617 74 ntBASIC-0.29□□□□□ -2.46
HLA-EP13747 SNORD113-6-201ENST00000363345 75 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 RNU6-934P-201ENST00000365154 107 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 RNU6-456P-201ENST00000384493 107 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 MIR610-201ENST00000385139 96 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 SNORA40.4-201ENST00000390971 128 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 RNA5SP451-201ENST00000410588 110 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 RNU6-325P-201ENST00000411132 105 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 MTATP6P14-201ENST00000455189 673 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 AL158050.2-201ENST00000605336 568 ntBASIC-0.3□□□□□ -2.46
HLA-EP13747 U8.5-201ENST00000364528 136 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 MIR122-201ENST00000385044 85 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 MIR644A-201ENST00000385262 94 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 SNORD100-201ENST00000408573 76 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 RNU2-59P-201ENST00000410482 191 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 AL390729.2-201ENST00000416137 156 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 MTND1P26-201ENST00000440488 538 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 MIR548AB-201ENST00000584917 84 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 AL022161.1-201ENST00000604390 213 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 AL158209.2-201ENST00000619266 216 ntBASIC-0.31□□□□□ -2.46
HLA-EP13747 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.31□□□□□ -2.46
HLA-EP13747 MIR409-201ENST00000362237 79 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 SNORA27.1-201ENST00000362604 124 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 SNORD115-32-201ENST00000364079 82 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 RNU6-396P-201ENST00000365369 105 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 RNU2-9P-201ENST00000410194 145 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 Z82188.1-201ENST00000436709 154 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 AL137792.2-201ENST00000443484 235 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 RNU7-56P-201ENST00000458744 62 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.32□□□□□ -2.46
HLA-EP13747 AP002963.1-201ENST00000530590 184 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.32□□□□□ -2.46
HLA-EP13747 AL355375.2-201ENST00000574825 175 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 MIR4676-201ENST00000583078 72 ntBASIC-0.32□□□□□ -2.46
HLA-EP13747 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
HLA-EP13747 MIR377-201ENST00000362145 69 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 RNU6-580P-201ENST00000365159 107 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 RNU6-282P-201ENST00000365357 103 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 RNU6-117P-201ENST00000365415 107 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 MIR145-201ENST00000384967 88 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 PCNPP3-201ENST00000393579 471 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 snoU13.11-201ENST00000459219 104 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 RNU7-180P-201ENST00000459240 63 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.33□□□□□ -2.46
HLA-EP13747 CCDC34P1-201ENST00000507441 517 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 AC093303.1-201ENST00000514549 295 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 SCARNA8-201ENST00000515924 131 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 RNU6-107P-201ENST00000516643 102 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 ELOCP32-201ENST00000548625 324 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.33□□□□□ -2.46
HLA-EP13747 MTND1P8-201ENST00000571424 950 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 CPDP1-201ENST00000579660 283 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 AF250324.2-201ENST00000608299 610 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 HULC.1-201ENST00000612720 240 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 AL591926.4-201ENST00000616895 298 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 AC022306.3-201ENST00000619930 550 ntBASIC-0.33□□□□□ -2.46
HLA-EP13747 SNORD45.3-201ENST00000363836 72 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 RNU6-280P-201ENST00000364145 104 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 RNU6-517P-201ENST00000384362 110 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 MTCO2P11-201ENST00000431069 680 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AL009048.1-201ENST00000450437 298 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.34□□□□□ -2.46
HLA-EP13747 UBL5P4-201ENST00000562584 236 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.34□□□□□ -2.46
HLA-EP13747 MIR4762-201ENST00000585261 75 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 TUSC7.1-201ENST00000610969 165 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AC016597.2-201ENST00000613256 341 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AC098679.4-201ENST00000624241 654 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AC127459.3-201ENST00000624328 466 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AC009161.2-201ENST00000624626 138 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 AC010608.3-201ENST00000625048 527 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 MIR1295B-201ENST00000636144 60 ntBASIC-0.34□□□□□ -2.46
HLA-EP13747 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.35□□□□□ -2.47
HLA-EP13747 RNU4-9P-201ENST00000364951 139 ntBASIC-0.35□□□□□ -2.47
HLA-EP13747 RNU6-541P-201ENST00000384709 110 ntBASIC-0.35□□□□□ -2.47
HLA-EP13747 MIR593-201ENST00000384856 100 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms