Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL512506.1-201ENST00000613918 449 ntBASIC-2.04□□□□□ -2.74
VCANP13611 SNORA26.5-201ENST00000391215 123 ntBASIC-2.04□□□□□ -2.74
VCANP13611 MIR1302-7-201ENST00000408841 72 ntBASIC-2.04□□□□□ -2.74
VCANP13611 Y_RNA.622-201ENST00000411091 108 ntBASIC-2.04□□□□□ -2.74
VCANP13611 RNA5SP47-201ENST00000517230 109 ntBASIC-2.04□□□□□ -2.74
VCANP13611 AC024995.1-201ENST00000523014 93 ntBASIC-2.04□□□□□ -2.74
VCANP13611 RPL22P17-201ENST00000438729 315 ntBASIC-2.04□□□□□ -2.74
VCANP13611 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-2.04□□□□□ -2.74
VCANP13611 AC005776.1-201ENST00000603164 290 ntBASIC-2.04□□□□□ -2.74
VCANP13611 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.05□□□□□ -2.74
VCANP13611 SNORD115-13-201ENST00000363358 82 ntBASIC-2.05□□□□□ -2.74
VCANP13611 snoZ40.1-201ENST00000364540 72 ntBASIC-2.05□□□□□ -2.74
VCANP13611 MCFD2P1-201ENST00000417812 300 ntBASIC-2.05□□□□□ -2.74
VCANP13611 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2.05□□□□□ -2.74
VCANP13611 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-2.05□□□□□ -2.74
VCANP13611 AC090617.8-201ENST00000623339 167 ntBASIC-2.05□□□□□ -2.74
VCANP13611 AC073869.9-201ENST00000641610 120 ntBASIC-2.05□□□□□ -2.74
VCANP13611 SNORD115-23-201ENST00000364461 82 ntBASIC-2.05□□□□□ -2.74
VCANP13611 RNU6-741P-201ENST00000383889 107 ntBASIC-2.05□□□□□ -2.74
VCANP13611 RNU6-1062P-201ENST00000383908 107 ntBASIC-2.05□□□□□ -2.74
VCANP13611 RNU6-1036P-201ENST00000383959 104 ntBASIC-2.05□□□□□ -2.74
VCANP13611 AP000568.1-201ENST00000282964 442 ntBASIC-2.06□□□□□ -2.74
VCANP13611 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.06□□□□□ -2.74
VCANP13611 MTCO2P33-201ENST00000402100 465 ntBASIC-2.06□□□□□ -2.74
VCANP13611 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-2.06□□□□□ -2.74
VCANP13611 AC068135.1-201ENST00000446164 246 ntBASIC-2.06□□□□□ -2.74
VCANP13611 AC010486.3-201ENST00000511602 785 ntBASIC-2.06□□□□□ -2.74
VCANP13611 AC022306.2-201ENST00000617563 647 ntBASIC-2.06□□□□□ -2.74
VCANP13611 RNU6-1229P-201ENST00000364295 107 ntBASIC-2.06□□□□□ -2.74
VCANP13611 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-2.06□□□□□ -2.74
VCANP13611 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-2.06□□□□□ -2.74
VCANP13611 MED28P2-201ENST00000475771 317 ntBASIC-2.06□□□□□ -2.74
VCANP13611 AC034229.4-201ENST00000607861 441 ntBASIC-2.06□□□□□ -2.74
VCANP13611 U2.21-201ENST00000637295 81 ntBASIC-2.06□□□□□ -2.74
VCANP13611 Y_RNA.143-201ENST00000363520 106 ntBASIC-2.07□□□□□ -2.74
VCANP13611 RNU2-53P-201ENST00000516257 147 ntBASIC-2.07□□□□□ -2.74
VCANP13611 SNORD92-201ENST00000585078 85 ntBASIC-2.07□□□□□ -2.74
VCANP13611 AC012433.1-201ENST00000588916 398 ntBASIC-2.07□□□□□ -2.74
VCANP13611 RNU6-438P-201ENST00000365561 103 ntBASIC-2.07□□□□□ -2.74
VCANP13611 MTND3P20-201ENST00000407663 186 ntBASIC-2.07□□□□□ -2.74
VCANP13611 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-2.07□□□□□ -2.74
VCANP13611 MTND2P17-201ENST00000550281 688 ntBASIC-2.07□□□□□ -2.74
VCANP13611 uc_338.10-201ENST00000621872 182 ntBASIC-2.07□□□□□ -2.74
VCANP13611 RNA5SP26-201ENST00000362406 119 ntBASIC-2.07□□□□□ -2.74
VCANP13611 RNU6-519P-201ENST00000410590 108 ntBASIC-2.07□□□□□ -2.74
VCANP13611 AC018889.1-201ENST00000605372 397 ntBASIC-2.07□□□□□ -2.74
VCANP13611 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.08□□□□□ -2.74
VCANP13611 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.08□□□□□ -2.74
VCANP13611 RNU2-33P-201ENST00000410344 192 ntBASIC-2.08□□□□□ -2.74
VCANP13611 SEPT14P24-201ENST00000447236 180 ntBASIC-2.08□□□□□ -2.74
VCANP13611 RNY4P25-201ENST00000459254 96 ntBASIC-2.08□□□□□ -2.74
VCANP13611 SEPT14P4-201ENST00000513445 186 ntBASIC-2.08□□□□□ -2.74
VCANP13611 RNU6-168P-201ENST00000516189 101 ntBASIC-2.08□□□□□ -2.74
VCANP13611 RNU6-1194P-201ENST00000516208 104 ntBASIC-2.08□□□□□ -2.74
VCANP13611 AP001189.2-201ENST00000527320 189 ntBASIC-2.08□□□□□ -2.74
VCANP13611 ZNF971P-201ENST00000562068 1249 ntBASIC-2.08□□□□□ -2.74
VCANP13611 AC108081.1-201ENST00000604358 221 ntBASIC-2.08□□□□□ -2.74
VCANP13611 RNU1-141P-201ENST00000364623 158 ntBASIC-2.08□□□□□ -2.74
VCANP13611 SNORA25.13-201ENST00000516395 103 ntBASIC-2.08□□□□□ -2.74
VCANP13611 MIR544B-201ENST00000582372 78 ntBASIC-2.08□□□□□ -2.74
VCANP13611 AL390123.1-201ENST00000603216 237 ntBASIC-2.08□□□□□ -2.74
VCANP13611 TTK-211ENST00000627129 240 ntTSL 5 BASIC-2.08□□□□□ -2.74
VCANP13611 MTND2P41-201ENST00000637599 773 ntBASIC-2.08□□□□□ -2.74
VCANP13611 RNU6-817P-201ENST00000391083 104 ntBASIC-2.09□□□□□ -2.74
VCANP13611 TPMTP2-201ENST00000414372 726 ntBASIC-2.09□□□□□ -2.74
VCANP13611 RNU6-258P-201ENST00000390884 101 ntBASIC-2.09□□□□□ -2.74
VCANP13611 MTND4LP10-201ENST00000435146 291 ntBASIC-2.09□□□□□ -2.74
VCANP13611 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-2.09□□□□□ -2.74
VCANP13611 AC008608.1-201ENST00000603910 127 ntBASIC-2.09□□□□□ -2.74
VCANP13611 MIR8054-201ENST00000620877 86 ntBASIC-2.09□□□□□ -2.74
VCANP13611 SNORD115-25-201ENST00000362619 82 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-973P-201ENST00000364690 107 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-695P-201ENST00000391157 104 ntBASIC-2.1□□□□□ -2.75
VCANP13611 SNORA81-201ENST00000408493 178 ntBASIC-2.1□□□□□ -2.75
VCANP13611 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-2.1□□□□□ -2.75
VCANP13611 AL139824.2-201ENST00000458731 1095 ntBASIC-2.1□□□□□ -2.75
VCANP13611 AC005592.1-201ENST00000566527 1640 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-354P-201ENST00000383862 107 ntBASIC-2.1□□□□□ -2.75
VCANP13611 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-610P-201ENST00000384264 107 ntBASIC-2.1□□□□□ -2.75
VCANP13611 AC068339.1-201ENST00000526965 141 ntBASIC-2.1□□□□□ -2.75
VCANP13611 MIR4778-201ENST00000577635 80 ntBASIC-2.1□□□□□ -2.75
VCANP13611 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-746P-201ENST00000384112 109 ntBASIC-2.1□□□□□ -2.75
VCANP13611 SKA2P1-201ENST00000425592 390 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-397P-201ENST00000516226 104 ntBASIC-2.1□□□□□ -2.75
VCANP13611 AL049861.1-201ENST00000603130 150 ntBASIC-2.1□□□□□ -2.75
VCANP13611 AL671309.1-201ENST00000603750 544 ntBASIC-2.1□□□□□ -2.75
VCANP13611 RNU6-1309P-201ENST00000363305 108 ntBASIC-2.11□□□□□ -2.75
VCANP13611 RNU6-190P-201ENST00000384154 102 ntBASIC-2.11□□□□□ -2.75
VCANP13611 ZNF736P7Y-201ENST00000425158 820 ntBASIC-2.11□□□□□ -2.75
VCANP13611 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.11□□□□□ -2.75
VCANP13611 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-2.11□□□□□ -2.75
VCANP13611 SNORA40.17-201ENST00000517256 115 ntBASIC-2.11□□□□□ -2.75
VCANP13611 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-2.11□□□□□ -2.75
VCANP13611 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-2.11□□□□□ -2.75
VCANP13611 RNU6-1243P-201ENST00000364028 107 ntBASIC-2.12□□□□□ -2.75
VCANP13611 MIR125B2-201ENST00000385128 89 ntBASIC-2.12□□□□□ -2.75
VCANP13611 RNU7-156P-201ENST00000517214 74 ntBASIC-2.12□□□□□ -2.75
VCANP13611 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms