Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 UBE2WP1-201ENST00000362030 340 ntBASIC1.86□□□□□ -2.11
CDH1P12830 SNORA25.1-201ENST00000362326 128 ntBASIC1.86□□□□□ -2.11
CDH1P12830 snoU2-30.2-201ENST00000362805 70 ntBASIC1.86□□□□□ -2.11
CDH1P12830 Y_RNA.60-201ENST00000362831 98 ntBASIC1.86□□□□□ -2.11
CDH1P12830 Y_RNA.352-201ENST00000365439 102 ntBASIC1.86□□□□□ -2.11
CDH1P12830 Y_RNA.477-201ENST00000384352 108 ntBASIC1.86□□□□□ -2.11
CDH1P12830 HMGN2P39-201ENST00000398005 273 ntBASIC1.86□□□□□ -2.11
CDH1P12830 AL117342.1-201ENST00000404861 406 ntBASIC1.86□□□□□ -2.11
CDH1P12830 AL603910.2-201ENST00000407268 136 ntBASIC1.86□□□□□ -2.11
CDH1P12830 MIR1283-2-201ENST00000408621 87 ntBASIC1.86□□□□□ -2.11
CDH1P12830 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH1P12830 AL135790.2-201ENST00000437701 267 ntBASIC1.86□□□□□ -2.11
CDH1P12830 MTND4LP30-201ENST00000454092 297 ntBASIC1.86□□□□□ -2.11
CDH1P12830 RNU6-1041P-201ENST00000516254 102 ntBASIC1.86□□□□□ -2.11
CDH1P12830 RNU6-1271P-201ENST00000517049 105 ntBASIC1.86□□□□□ -2.11
CDH1P12830 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH1P12830 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH1P12830 AC022513.1-201ENST00000624512 117 ntBASIC1.86□□□□□ -2.11
CDH1P12830 MIR338-201ENST00000636369 67 ntBASIC1.86□□□□□ -2.11
CDH1P12830 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH1P12830 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CDH1P12830 RNU1-58P-201ENST00000362413 163 ntBASIC1.85□□□□□ -2.11
CDH1P12830 RNU6-271P-201ENST00000363858 105 ntBASIC1.85□□□□□ -2.11
CDH1P12830 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
CDH1P12830 Y_RNA.416-201ENST00000384014 113 ntBASIC1.85□□□□□ -2.11
CDH1P12830 MIR548H3-201ENST00000408771 118 ntBASIC1.85□□□□□ -2.11
CDH1P12830 ATP5J2P3-201ENST00000451550 258 ntBASIC1.85□□□□□ -2.11
CDH1P12830 RPS26P55-201ENST00000471178 356 ntBASIC1.85□□□□□ -2.11
CDH1P12830 RNA5SP20-201ENST00000515976 84 ntBASIC1.85□□□□□ -2.11
CDH1P12830 SNORA70.12-201ENST00000516084 153 ntBASIC1.85□□□□□ -2.11
CDH1P12830 RNU6-1023P-201ENST00000516137 106 ntBASIC1.85□□□□□ -2.11
CDH1P12830 Y_RNA.673-201ENST00000516306 88 ntBASIC1.85□□□□□ -2.11
CDH1P12830 SNORA27.4-201ENST00000516650 95 ntBASIC1.85□□□□□ -2.11
CDH1P12830 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH1P12830 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH1P12830 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
CDH1P12830 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH1P12830 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH1P12830 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDH1P12830 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDH1P12830 Y_RNA.20-201ENST00000362479 113 ntBASIC1.84□□□□□ -2.11
CDH1P12830 Y_RNA.44-201ENST00000362676 108 ntBASIC1.84□□□□□ -2.11
CDH1P12830 RNU6-23P-201ENST00000363283 107 ntBASIC1.84□□□□□ -2.11
CDH1P12830 Y_RNA.172-201ENST00000363765 102 ntBASIC1.84□□□□□ -2.11
CDH1P12830 RNU6-379P-201ENST00000363813 104 ntBASIC1.84□□□□□ -2.11
CDH1P12830 Y_RNA.275-201ENST00000364726 110 ntBASIC1.84□□□□□ -2.11
CDH1P12830 RNU6-407P-201ENST00000365280 104 ntBASIC1.84□□□□□ -2.11
CDH1P12830 RNU6-514P-201ENST00000384208 107 ntBASIC1.84□□□□□ -2.11
CDH1P12830 RNU6-417P-201ENST00000384712 107 ntBASIC1.84□□□□□ -2.11
CDH1P12830 MIR518A2-201ENST00000384966 87 ntBASIC1.84□□□□□ -2.11
CDH1P12830 MIR1253-201ENST00000408273 105 ntBASIC1.84□□□□□ -2.11
CDH1P12830 RNU6-710P-201ENST00000410424 105 ntBASIC1.84□□□□□ -2.11
CDH1P12830 HSPE1P13-201ENST00000451143 297 ntBASIC1.84□□□□□ -2.11
CDH1P12830 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
CDH1P12830 MIR4643-201ENST00000577473 78 ntBASIC1.84□□□□□ -2.11
CDH1P12830 MIR3671-201ENST00000580455 88 ntBASIC1.84□□□□□ -2.11
CDH1P12830 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH1P12830 U6.73-201ENST00000619194 103 ntBASIC1.84□□□□□ -2.11
CDH1P12830 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.84□□□□□ -2.12
CDH1P12830 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.84□□□□□ -2.12
CDH1P12830 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDH1P12830 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CDH1P12830 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
CDH1P12830 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
CDH1P12830 Y_RNA.217-201ENST00000364214 105 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RNU6-740P-201ENST00000364734 105 ntBASIC1.83□□□□□ -2.12
CDH1P12830 Y_RNA.368-201ENST00000365547 113 ntBASIC1.83□□□□□ -2.12
CDH1P12830 Y_RNA.539-201ENST00000384635 107 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RNU6-1248P-201ENST00000391096 64 ntBASIC1.83□□□□□ -2.12
CDH1P12830 SNORD58.1-201ENST00000391313 66 ntBASIC1.83□□□□□ -2.12
CDH1P12830 OOSP1P1-201ENST00000423265 274 ntBASIC1.83□□□□□ -2.12
CDH1P12830 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
CDH1P12830 AC099677.2-201ENST00000436385 175 ntBASIC1.83□□□□□ -2.12
CDH1P12830 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH1P12830 Y_RNA.641-201ENST00000459414 105 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RPS27P22-201ENST00000478056 241 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RN7SL429P-201ENST00000479090 223 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RN7SL489P-201ENST00000486185 223 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RN7SL327P-201ENST00000488659 223 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RNU6-1146P-201ENST00000516282 102 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RNU6-1337P-201ENST00000516525 95 ntBASIC1.83□□□□□ -2.12
CDH1P12830 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH1P12830 MIR3945-201ENST00000581853 98 ntBASIC1.83□□□□□ -2.12
CDH1P12830 MIR4438-201ENST00000585271 93 ntBASIC1.83□□□□□ -2.12
CDH1P12830 RN7SL853P-201ENST00000617250 223 ntBASIC1.83□□□□□ -2.12
CDH1P12830 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.83□□□□□ -2.12
CDH1P12830 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.83□□□□□ -2.12
CDH1P12830 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDH1P12830 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDH1P12830 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDH1P12830 Y_RNA.54-201ENST00000362766 105 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU1-22P-201ENST00000363334 158 ntBASIC1.82□□□□□ -2.12
CDH1P12830 SNORA33-201ENST00000363664 130 ntBASIC1.82□□□□□ -2.12
CDH1P12830 SNORD27-201ENST00000363981 72 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU6-801P-201ENST00000364087 105 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
CDH1P12830 Y_RNA.277-201ENST00000364754 102 ntBASIC1.82□□□□□ -2.12
CDH1P12830 Y_RNA.310-201ENST00000365063 113 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU6-117P-201ENST00000365415 107 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU6-662P-201ENST00000384253 104 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms