Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
TOP1P11387 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
TOP1P11387 AC144568.1-201ENST00000520139 137 ntBASIC1.27□□□□□ -2.21
TOP1P11387 AC055872.1-201ENST00000570978 278 ntBASIC1.27□□□□□ -2.21
TOP1P11387 AC092447.9-201ENST00000603395 144 ntBASIC1.27□□□□□ -2.21
TOP1P11387 AC007485.1-201ENST00000616755 206 ntBASIC1.27□□□□□ -2.21
TOP1P11387 snoZ196.1-201ENST00000625269 89 ntBASIC1.27□□□□□ -2.21
TOP1P11387 MIR410-201ENST00000362222 80 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNU5F-3P-201ENST00000363767 117 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNU6-961P-201ENST00000363893 105 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNU6-454P-201ENST00000364292 107 ntBASIC1.26□□□□□ -2.21
TOP1P11387 Y_RNA.287-201ENST00000364853 94 ntBASIC1.26□□□□□ -2.21
TOP1P11387 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
TOP1P11387 Y_RNA.460-201ENST00000384255 102 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNY3P4-201ENST00000384428 101 ntBASIC1.26□□□□□ -2.21
TOP1P11387 SNORD12B-201ENST00000410433 91 ntBASIC1.26□□□□□ -2.21
TOP1P11387 Y_RNA.605-201ENST00000410577 105 ntBASIC1.26□□□□□ -2.21
TOP1P11387 AC074133.1-201ENST00000515696 183 ntBASIC1.26□□□□□ -2.21
TOP1P11387 SNORA40.9-201ENST00000515895 93 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNU6-1170P-201ENST00000515974 106 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNU6-1041P-201ENST00000516254 102 ntBASIC1.26□□□□□ -2.21
TOP1P11387 RNU6-1012P-201ENST00000516606 109 ntBASIC1.26□□□□□ -2.21
TOP1P11387 AC018448.1-201ENST00000552843 316 ntBASIC1.26□□□□□ -2.21
TOP1P11387 MIR5188-201ENST00000583467 113 ntBASIC1.26□□□□□ -2.21
TOP1P11387 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.26□□□□□ -2.21
TOP1P11387 AC090574.1-201ENST00000623186 233 ntBASIC1.26□□□□□ -2.21
TOP1P11387 AL606534.2-204ENST00000635008 178 ntBASIC1.26□□□□□ -2.21
TOP1P11387 MIR338-201ENST00000636369 67 ntBASIC1.26□□□□□ -2.21
TOP1P11387 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.25□□□□□ -2.21
TOP1P11387 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TOP1P11387 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
TOP1P11387 Y_RNA.645-201ENST00000391229 102 ntBASIC1.25□□□□□ -2.21
TOP1P11387 TOMM22P2-201ENST00000430735 237 ntBASIC1.25□□□□□ -2.21
TOP1P11387 HMGN2P34-201ENST00000437647 269 ntBASIC1.25□□□□□ -2.21
TOP1P11387 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.25□□□□□ -2.21
TOP1P11387 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.25□□□□□ -2.21
TOP1P11387 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.25□□□□□ -2.21
TOP1P11387 CYCSP23-201ENST00000519781 313 ntBASIC1.25□□□□□ -2.21
TOP1P11387 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.25□□□□□ -2.21
TOP1P11387 VN1R91P-201ENST00000594377 169 ntBASIC1.25□□□□□ -2.21
TOP1P11387 AL353149.1-201ENST00000610667 244 ntBASIC1.25□□□□□ -2.21
TOP1P11387 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.25□□□□□ -2.21
TOP1P11387 U6.108-201ENST00000637764 58 ntBASIC1.25□□□□□ -2.21
TOP1P11387 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
TOP1P11387 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
TOP1P11387 RNU1-96P-201ENST00000364163 162 ntBASIC1.24□□□□□ -2.21
TOP1P11387 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
TOP1P11387 MCFD2P1-201ENST00000417812 300 ntBASIC1.24□□□□□ -2.21
TOP1P11387 MTCYBP6-201ENST00000441810 138 ntBASIC1.24□□□□□ -2.21
TOP1P11387 RPS29P28-201ENST00000446439 141 ntBASIC1.24□□□□□ -2.21
TOP1P11387 MTND4P19-201ENST00000446659 478 ntBASIC1.24□□□□□ -2.21
TOP1P11387 SNORD65B-201ENST00000459126 73 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC114982.1-201ENST00000469402 321 ntBASIC1.24□□□□□ -2.21
TOP1P11387 Y_RNA.701-201ENST00000516812 110 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC020661.2-201ENST00000560114 134 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC006600.1-201ENST00000572529 153 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.24□□□□□ -2.21
TOP1P11387 AC006157.1-201ENST00000611750 366 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC011476.5-201ENST00000615594 130 ntBASIC1.24□□□□□ -2.21
TOP1P11387 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC090971.5-201ENST00000621102 293 ntBASIC1.24□□□□□ -2.21
TOP1P11387 AC006001.4-201ENST00000622243 395 ntBASIC1.24□□□□□ -2.21
TOP1P11387 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
TOP1P11387 Y_RNA.27-201ENST00000362540 103 ntBASIC1.23□□□□□ -2.21
TOP1P11387 Y_RNA.148-201ENST00000363557 117 ntBASIC1.23□□□□□ -2.21
TOP1P11387 RNU6-926P-201ENST00000384075 107 ntBASIC1.23□□□□□ -2.21
TOP1P11387 MIR194-1-201ENST00000384892 85 ntBASIC1.23□□□□□ -2.21
TOP1P11387 RNA5SP467-201ENST00000391274 118 ntBASIC1.23□□□□□ -2.21
TOP1P11387 AL355796.1-201ENST00000406706 323 ntBASIC1.23□□□□□ -2.21
TOP1P11387 AL354751.2-201ENST00000415471 210 ntBASIC1.23□□□□□ -2.21
TOP1P11387 SNX2P2-201ENST00000424553 323 ntBASIC1.23□□□□□ -2.21
TOP1P11387 RAB28P5-201ENST00000427490 651 ntBASIC1.23□□□□□ -2.21
TOP1P11387 AL160004.2-201ENST00000432935 350 ntBASIC1.23□□□□□ -2.21
TOP1P11387 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.23□□□□□ -2.21
TOP1P11387 UQCRBP2-201ENST00000447827 297 ntBASIC1.23□□□□□ -2.21
TOP1P11387 RNU6-408P-201ENST00000515910 100 ntBASIC1.23□□□□□ -2.21
TOP1P11387 RNU6-966P-201ENST00000516479 104 ntBASIC1.23□□□□□ -2.21
TOP1P11387 SNORA40.14-201ENST00000516543 86 ntBASIC1.23□□□□□ -2.21
TOP1P11387 RNU6-1153P-201ENST00000516760 105 ntBASIC1.23□□□□□ -2.21
TOP1P11387 CYP3A52P-201ENST00000563326 91 ntBASIC1.23□□□□□ -2.21
TOP1P11387 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.23□□□□□ -2.21
TOP1P11387 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
TOP1P11387 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
TOP1P11387 AC134503.1-201ENST00000633048 54 ntBASIC1.23□□□□□ -2.21
TOP1P11387 U6.92-201ENST00000636464 89 ntBASIC1.23□□□□□ -2.21
TOP1P11387 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TOP1P11387 Y_RNA.28-201ENST00000362554 111 ntBASIC1.22□□□□□ -2.21
TOP1P11387 snoU2-30.2-201ENST00000362805 70 ntBASIC1.22□□□□□ -2.21
TOP1P11387 Y_RNA.128-201ENST00000363391 112 ntBASIC1.22□□□□□ -2.21
TOP1P11387 Y_RNA.216-201ENST00000364205 93 ntBASIC1.22□□□□□ -2.21
TOP1P11387 RNU6-1240P-201ENST00000365155 104 ntBASIC1.22□□□□□ -2.21
TOP1P11387 RNU6-1264P-201ENST00000383891 107 ntBASIC1.22□□□□□ -2.21
TOP1P11387 RNU6-1080P-201ENST00000383982 107 ntBASIC1.22□□□□□ -2.21
TOP1P11387 Y_RNA.458-201ENST00000384240 102 ntBASIC1.22□□□□□ -2.21
TOP1P11387 Y_RNA.498-201ENST00000384460 102 ntBASIC1.22□□□□□ -2.21
TOP1P11387 RNU6-417P-201ENST00000384712 107 ntBASIC1.22□□□□□ -2.21
TOP1P11387 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
TOP1P11387 MIR1302-11-201ENST00000408051 138 ntBASIC1.22□□□□□ -2.21
TOP1P11387 MIR1302-9-201ENST00000408365 138 ntBASIC1.22□□□□□ -2.21
TOP1P11387 MIR1302-10-201ENST00000408734 138 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms