Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-117P-201ENST00000365415 107 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-136P-201ENST00000384663 107 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 MIR653-201ENST00000385279 96 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 Y_RNA.646-201ENST00000410980 101 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 MTND1P2-201ENST00000430604 821 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 AC022493.2-201ENST00000506122 481 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 SNORA31.2-201ENST00000516019 134 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-63P-201ENST00000516690 95 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 RNA5SP404-201ENST00000517118 132 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 AC023442.1-201ENST00000531247 422 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 AC091895.1-201ENST00000624494 256 ntBASIC0.86□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-1188P-201ENST00000363795 107 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 Y_RNA.243-201ENST00000364481 109 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 SNORD81.2-201ENST00000365153 76 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-926P-201ENST00000384075 107 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-310P-201ENST00000384655 107 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 SNORD41-201ENST00000386967 70 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 SNORA75.6-201ENST00000391318 127 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 Y_RNA.592-201ENST00000410274 109 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-1156P-201ENST00000410365 100 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 RNU5A-5P-201ENST00000411054 116 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 AL049830.1-201ENST00000468034 425 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 AL163540.1-201ENST00000485382 386 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 SNORA31.4-201ENST00000516049 129 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-947P-201ENST00000516264 106 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 SNORA70.22-201ENST00000517160 124 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 MIR5690-201ENST00000583739 73 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 AC087588.2-201ENST00000617667 426 ntBASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.85□□□□□ -2.27
IGHV3-43DP0DP04 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 SNORD114-7-201ENST00000362520 77 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 Y_RNA.327-201ENST00000365201 102 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-53P-201ENST00000365367 106 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 SNORA2.2-201ENST00000365473 135 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 RNU6-1304P-201ENST00000411374 106 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 RNU7-4P-201ENST00000516961 62 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 AL358944.1-201ENST00000528537 144 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 AC004467.1-201ENST00000615678 330 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 AC022306.2-201ENST00000617563 647 ntBASIC0.84□□□□□ -2.27
IGHV3-43DP0DP04 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
IGHV3-43DP0DP04 MIRLET7C-201ENST00000362160 84 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-961P-201ENST00000363893 105 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 SNORD115-30-201ENST00000364117 82 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 RNU4-41P-201ENST00000364426 143 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-890P-201ENST00000384121 107 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 SNORA70.7-201ENST00000384159 133 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.505-201ENST00000384489 102 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 ELOCP24-201ENST00000456370 334 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 RNU2-12P-201ENST00000517216 168 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 AL117336.2-201ENST00000602435 335 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 AC006380.1-201ENST00000603598 186 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 AL357312.1-201ENST00000603879 298 ntBASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
IGHV3-43DP0DP04 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 RNA5SP511-201ENST00000410487 115 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.599-201ENST00000410489 109 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 AL354751.2-201ENST00000415471 210 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 FCF1P4-201ENST00000448326 183 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 RPL39P39-201ENST00000455840 151 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 RPL30P15-201ENST00000457129 321 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 RNU7-169P-201ENST00000459456 61 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 OR2A41P-201ENST00000473586 105 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 SNORA70.12-201ENST00000516084 153 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 RNU6-1116P-201ENST00000517269 99 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 AC144568.1-201ENST00000520139 137 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 AC055872.1-201ENST00000570978 278 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 snoU13.31-201ENST00000607291 104 ntBASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.82□□□□□ -2.28
IGHV3-43DP0DP04 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 RNU1-124P-201ENST00000363861 145 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 RNY3P11-201ENST00000364153 102 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.361-201ENST00000365515 120 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.605-201ENST00000410577 105 ntBASIC0.81□□□□□ -2.28
IGHV3-43DP0DP04 Y_RNA.621-201ENST00000411065 96 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms