Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SNORD113-7-201ENST00000363762 77 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 MIR520F-201ENST00000384824 87 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 SNORD37.1-201ENST00000390968 65 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 RNA5SP63-201ENST00000391225 112 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.06□□□□□ -2.42
CTSDP07339 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.06□□□□□ -2.42
CTSDP07339 MTCO1P20-201ENST00000425366 358 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 AC073261.1-201ENST00000429409 121 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 RPL30P10-201ENST00000488148 337 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 MTCO2P30-201ENST00000503662 364 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.06□□□□□ -2.42
CTSDP07339 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 RNU6-759P-201ENST00000516740 103 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.06□□□□□ -2.42
CTSDP07339 MIR4762-201ENST00000585261 75 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 RBM11P1-201ENST00000604951 799 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 AC109347.2-201ENST00000610220 349 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 AC104260.1-201ENST00000616660 539 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
CTSDP07339 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.06□□□□□ -2.42
CTSDP07339 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.07□□□□□ -2.42
CTSDP07339 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 RNU6-716P-201ENST00000365621 103 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 RNU6-790P-201ENST00000384479 105 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 MTND2P18-201ENST00000419962 1030 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 AL590632.1-201ENST00000424289 371 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.07□□□□□ -2.42
CTSDP07339 SNORD123-201ENST00000459473 70 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.07□□□□□ -2.42
CTSDP07339 SCARNA1-201ENST00000517138 166 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 MTCO2P4-201ENST00000517968 247 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 AC134698.4-201ENST00000523451 826 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 AC026371.1-201ENST00000551867 419 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 AC073534.2-201ENST00000620377 381 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.07□□□□□ -2.42
CTSDP07339 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNU4-66P-201ENST00000365199 138 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNU6-38P-201ENST00000384085 107 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNU6-679P-201ENST00000391003 106 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 MIR873-201ENST00000401120 77 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.08□□□□□ -2.42
CTSDP07339 RNU7-187P-201ENST00000458985 68 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AC046134.1-201ENST00000514454 666 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNA5SP401-201ENST00000515920 127 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNU6-977P-201ENST00000516411 103 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 RNA5SP330-201ENST00000517096 96 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AC060788.1-201ENST00000521318 469 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AC009094.1-201ENST00000564443 426 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AF250324.2-201ENST00000608299 610 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AC092807.2-201ENST00000609367 243 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 FAM157A-202ENST00000615155 405 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 AL591926.4-201ENST00000616895 298 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.08□□□□□ -2.42
CTSDP07339 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.08□□□□□ -2.42
CTSDP07339 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CTSDP07339 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.09□□□□□ -2.42
CTSDP07339 MTND1P26-201ENST00000440488 538 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 MTND1P27-201ENST00000451117 902 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 snoU13.21-201ENST00000459368 105 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 RPL23AP91-201ENST00000569211 455 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 MIR3915-201ENST00000578518 97 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 MIR548AO-201ENST00000579992 96 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 MIR5190-201ENST00000581537 80 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 SNORA25.18-201ENST00000607153 114 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 uc_338.16-201ENST00000621804 95 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 AC007494.3-201ENST00000624660 743 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 MIR371B-201ENST00000638082 66 ntBASIC-0.09□□□□□ -2.42
CTSDP07339 RNA5SP214-201ENST00000363378 118 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 RNU6-396P-201ENST00000365369 105 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 RNU6-136P-201ENST00000384663 107 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 MT-TH-201ENST00000387441 69 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 AL139396.1-201ENST00000421137 167 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.1□□□□□ -2.43
CTSDP07339 AC073464.1-201ENST00000429823 534 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.1□□□□□ -2.43
CTSDP07339 MTND3P3-201ENST00000505004 126 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 SNORA40.12-201ENST00000516329 111 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 AL355375.2-201ENST00000574825 175 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 POLR3GP2-201ENST00000588366 668 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 AC012433.1-201ENST00000588916 398 ntBASIC-0.1□□□□□ -2.43
CTSDP07339 MIR377-201ENST00000362145 69 ntBASIC-0.11□□□□□ -2.43
CTSDP07339 SNORD118-201ENST00000363593 134 ntBASIC-0.11□□□□□ -2.43
CTSDP07339 RNU6-128P-201ENST00000383976 107 ntBASIC-0.11□□□□□ -2.43
CTSDP07339 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.11□□□□□ -2.43
CTSDP07339 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.11□□□□□ -2.43
CTSDP07339 AL390729.2-201ENST00000416137 156 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 468.9 ms