Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-1116P-201ENST00000517269 99 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 AC090049.2-201ENST00000550377 109 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.81□□□□□ -2.28
HLA-DPB1P04440 AC068790.6-201ENST00000602558 258 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 AL669831.3-213ENST00000636676 183 ntBASIC0.81□□□□□ -2.28
HLA-DPB1P04440 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HLA-DPB1P04440 MIR337-201ENST00000362281 93 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 RNU6-1301P-201ENST00000362724 104 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.164-201ENST00000363709 102 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 RNU1-124P-201ENST00000363861 145 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 MIR222-201ENST00000384992 110 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HLA-DPB1P04440 Z98949.2-201ENST00000440996 144 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 UBE2V1P7-201ENST00000446395 340 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 RPL17P19-201ENST00000489069 552 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DPB1P04440 AC116353.2-201ENST00000505332 712 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 RNU6-947P-201ENST00000516264 106 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
HLA-DPB1P04440 AP002004.2-201ENST00000531656 154 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 AC127459.3-201ENST00000624328 466 ntBASIC0.8□□□□□ -2.28
HLA-DPB1P04440 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DPB1P04440 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNU4-79P-201ENST00000362764 141 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNU6-961P-201ENST00000363893 105 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNU4-41P-201ENST00000364426 143 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNU6-1054P-201ENST00000411293 104 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DPB1P04440 PDCL2P1-201ENST00000419302 352 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RPL23AP50-201ENST00000434149 455 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC245047.7-201ENST00000440265 293 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC104332.1-201ENST00000440471 797 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 FGF7P6-202ENST00000451282 293 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC233266.1-201ENST00000454518 96 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC022493.2-201ENST00000506122 481 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNU7-12P-201ENST00000516030 62 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 RNU6-1096P-201ENST00000517089 102 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 MIR3684-201ENST00000579779 74 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC242852.1-201ENST00000612151 96 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 PISRT1.1-201ENST00000616930 107 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC087588.2-201ENST00000617667 426 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 AC244015.1-201ENST00000622301 99 ntBASIC0.79□□□□□ -2.28
HLA-DPB1P04440 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 Y_RNA.361-201ENST00000365515 120 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNU6-1080P-201ENST00000383982 107 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNU6-767P-201ENST00000384132 107 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 MIR526A1-201ENST00000384897 85 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNA5SP482-201ENST00000391269 118 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNA5SP475-201ENST00000410568 110 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNU6-1304P-201ENST00000411374 106 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DPB1P04440 MIR2053-201ENST00000459295 91 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNU6-1278P-201ENST00000516130 107 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 RNU7-28P-201ENST00000516759 62 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 AC023442.1-201ENST00000531247 422 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
HLA-DPB1P04440 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 CASC19-280ENST00000642102 1351 ntBASIC0.78□□□□□ -2.28
HLA-DPB1P04440 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.77□□□□□ -2.29
HLA-DPB1P04440 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
HLA-DPB1P04440 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
HLA-DPB1P04440 Y_RNA.4-201ENST00000362333 112 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RNU6-845P-201ENST00000362578 103 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 Y_RNA.160-201ENST00000363677 92 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 SNORD115-30-201ENST00000364117 82 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 Y_RNA.279-201ENST00000364763 95 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 SNORA2.2-201ENST00000365473 135 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 AL451046.2-201ENST00000403074 277 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RNA5SP511-201ENST00000410487 115 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 Y_RNA.646-201ENST00000410980 101 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RPEP5-201ENST00000441137 268 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 HSPE1P13-201ENST00000451143 297 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RPL30P15-201ENST00000457129 321 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 snoU13.25-201ENST00000458945 104 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 AL049830.1-201ENST00000468034 425 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RPS26P48-201ENST00000491713 339 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RNU6-408P-201ENST00000515910 100 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 SNORD79.1-201ENST00000516069 84 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 Y_RNA.691-201ENST00000516611 103 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 AC005899.2-201ENST00000584353 90 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 AC139792.2-201ENST00000624218 587 ntBASIC0.77□□□□□ -2.29
HLA-DPB1P04440 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
HLA-DPB1P04440 RNY3P11-201ENST00000364153 102 ntBASIC0.76□□□□□ -2.29
HLA-DPB1P04440 RNU6-926P-201ENST00000384075 107 ntBASIC0.76□□□□□ -2.29
HLA-DPB1P04440 RNU6-310P-201ENST00000384655 107 ntBASIC0.76□□□□□ -2.29
HLA-DPB1P04440 MIR19B1-201ENST00000384829 87 ntBASIC0.76□□□□□ -2.29
HLA-DPB1P04440 MIR562-201ENST00000384894 95 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms