Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Z98949.2-201ENST00000440996 144 ntBASIC-0.97□□□□□ -2.56
APOBP04114 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.97□□□□□ -2.56
APOBP04114 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.97□□□□□ -2.56
APOBP04114 MIR5006-201ENST00000583027 110 ntBASIC-0.97□□□□□ -2.56
APOBP04114 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.97□□□□□ -2.56
APOBP04114 SNORD98-201ENST00000636377 67 ntBASIC-0.97□□□□□ -2.56
APOBP04114 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.97□□□□□ -2.57
APOBP04114 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.97□□□□□ -2.57
APOBP04114 MIR588-201ENST00000384900 83 ntBASIC-0.97□□□□□ -2.57
APOBP04114 MTCO3P17-201ENST00000443775 513 ntBASIC-0.97□□□□□ -2.57
APOBP04114 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.98□□□□□ -2.57
APOBP04114 MIR1185-2-201ENST00000408687 86 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.98□□□□□ -2.57
APOBP04114 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.98□□□□□ -2.57
APOBP04114 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
APOBP04114 USMG5P1-201ENST00000425964 177 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AC098614.3-201ENST00000438957 440 ntBASIC-0.98□□□□□ -2.57
APOBP04114 SUMO2P5-201ENST00000506790 245 ntBASIC-0.98□□□□□ -2.57
APOBP04114 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.98□□□□□ -2.57
APOBP04114 AC008752.3-201ENST00000588113 712 ntBASIC-0.98□□□□□ -2.57
APOBP04114 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.98□□□□□ -2.57
APOBP04114 U6.108-201ENST00000637764 58 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.98□□□□□ -2.57
APOBP04114 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AC243428.1-201ENST00000421099 264 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AL138752.1-201ENST00000452964 351 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU7-185P-201ENST00000459215 60 ntBASIC-0.98□□□□□ -2.57
APOBP04114 PRDX4P1-201ENST00000507189 574 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-714P-201ENST00000516963 103 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AL117336.2-201ENST00000602435 335 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AC087683.2-201ENST00000611384 326 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-543P-201ENST00000362576 108 ntBASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.98□□□□□ -2.57
APOBP04114 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.98□□□□□ -2.57
APOBP04114 VN1R87P-201ENST00000596706 487 ntBASIC-0.98□□□□□ -2.57
APOBP04114 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
APOBP04114 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.99□□□□□ -2.57
APOBP04114 RNU6-553P-201ENST00000364047 96 ntBASIC-0.99□□□□□ -2.57
APOBP04114 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.99□□□□□ -2.57
APOBP04114 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.99□□□□□ -2.57
APOBP04114 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.99□□□□□ -2.57
APOBP04114 RPL39P36-201ENST00000490784 156 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC018714.1-201ENST00000605028 208 ntBASIC-0.99□□□□□ -2.57
APOBP04114 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC090615.1-201ENST00000577519 154 ntBASIC-0.99□□□□□ -2.57
APOBP04114 MIR3139-201ENST00000579145 76 ntBASIC-0.99□□□□□ -2.57
APOBP04114 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC007969.2-201ENST00000441891 191 ntBASIC-0.99□□□□□ -2.57
APOBP04114 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
APOBP04114 MTND1P36-201ENST00000522384 936 ntBASIC-0.99□□□□□ -2.57
APOBP04114 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
APOBP04114 AL139022.2-201ENST00000606934 443 ntBASIC-0.99□□□□□ -2.57
APOBP04114 SNORA70.25-201ENST00000612741 95 ntBASIC-0.99□□□□□ -2.57
APOBP04114 MIR6507-201ENST00000613630 70 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC073869.9-201ENST00000641610 120 ntBASIC-0.99□□□□□ -2.57
APOBP04114 RNU4-15P-201ENST00000362613 141 ntBASIC-0.99□□□□□ -2.57
APOBP04114 RNU6-545P-201ENST00000362681 104 ntBASIC-0.99□□□□□ -2.57
APOBP04114 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.99□□□□□ -2.57
APOBP04114 AC079781.2-201ENST00000446424 169 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.99□□□□□ -2.57
APOBP04114 RNU6-58P-201ENST00000517143 103 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC026470.2-201ENST00000561492 181 ntBASIC-0.99□□□□□ -2.57
APOBP04114 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.99□□□□□ -2.57
APOBP04114 RNU5E-7P-201ENST00000365290 117 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU7-73P-201ENST00000458743 63 ntBASIC-1□□□□□ -2.57
APOBP04114 RPL23AP75-201ENST00000491601 451 ntBASIC-1□□□□□ -2.57
APOBP04114 AL358944.1-201ENST00000528537 144 ntBASIC-1□□□□□ -2.57
APOBP04114 AP003072.1-201ENST00000531740 145 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU6-86P-201ENST00000606534 107 ntBASIC-1□□□□□ -2.57
APOBP04114 Y_RNA.71-201ENST00000362892 104 ntBASIC-1□□□□□ -2.57
APOBP04114 SNORD24-201ENST00000383884 75 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU6-535P-201ENST00000384722 107 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU6-278P-201ENST00000390945 109 ntBASIC-1□□□□□ -2.57
APOBP04114 MTND1P26-201ENST00000440488 538 ntBASIC-1□□□□□ -2.57
APOBP04114 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1□□□□□ -2.57
APOBP04114 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1□□□□□ -2.57
APOBP04114 AC099654.9-201ENST00000637055 678 ntBASIC-1□□□□□ -2.57
APOBP04114 SNORD56.1-201ENST00000362913 68 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU6-873P-201ENST00000363833 107 ntBASIC-1□□□□□ -2.57
APOBP04114 Y_RNA.231-201ENST00000364358 102 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU6-432P-201ENST00000384196 109 ntBASIC-1□□□□□ -2.57
APOBP04114 RNU6-205P-201ENST00000390858 107 ntBASIC-1□□□□□ -2.57
APOBP04114 MIR889-201ENST00000401280 79 ntBASIC-1□□□□□ -2.57
APOBP04114 AC010975.2-201ENST00000427781 588 ntBASIC-1□□□□□ -2.57
APOBP04114 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1□□□□□ -2.57
APOBP04114 AC090617.3-201ENST00000573670 475 ntBASIC-1□□□□□ -2.57
APOBP04114 AP000533.3-201ENST00000447704 118 ntBASIC-1.01□□□□□ -2.57
APOBP04114 AC091951.3-201ENST00000504093 246 ntBASIC-1.01□□□□□ -2.57
APOBP04114 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.01□□□□□ -2.57
APOBP04114 SNORA31.19-201ENST00000517079 126 ntBASIC-1.01□□□□□ -2.57
APOBP04114 MIR4752-201ENST00000579672 72 ntBASIC-1.01□□□□□ -2.57
APOBP04114 AL359547.2-201ENST00000615810 418 ntBASIC-1.01□□□□□ -2.57
APOBP04114 AC138649.3-201ENST00000622154 254 ntBASIC-1.01□□□□□ -2.57
APOBP04114 RNA5SP405-201ENST00000363059 114 ntBASIC-1.01□□□□□ -2.57
APOBP04114 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.01□□□□□ -2.57
APOBP04114 SNORD116-23-201ENST00000384645 92 ntBASIC-1.01□□□□□ -2.57
APOBP04114 RNU6-114P-201ENST00000384704 105 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms