Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.62□□□□□ -2.51
SPTA1P02549 AP001836.1-201ENST00000604675 523 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 MIR8084-201ENST00000614105 89 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 FRG1KP-201ENST00000623592 341 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 AC132825.7-201ENST00000638744 335 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 RNU6-371P-201ENST00000364283 108 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 RNU4-16P-201ENST00000364737 141 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 U6.112-201ENST00000384129 70 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 MIR208B-201ENST00000401172 77 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 RPL23AP75-201ENST00000491601 451 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 RNU6-135P-201ENST00000516769 101 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 MIR3152-201ENST00000579801 74 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 AC099785.1-201ENST00000605697 437 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 AC134878.1-201ENST00000619901 243 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 SCARNA4-201ENST00000629045 128 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 MIR16-2-201ENST00000362117 81 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 RNU5B-1-201ENST00000363286 116 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AC117470.1-201ENST00000381974 330 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 SNORD38C-201ENST00000384381 69 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 MIR802-201ENST00000390235 94 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
SPTA1P02549 AC018865.2-201ENST00000423631 129 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AL358934.1-201ENST00000432346 324 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 MTATP6P14-201ENST00000455189 673 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.63□□□□□ -2.51
SPTA1P02549 AC079395.1-201ENST00000510981 262 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AC068587.5-201ENST00000528506 175 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AL445523.1-201ENST00000451184 1362 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 MIR15B-201ENST00000385045 98 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 MT-TY-201ENST00000387409 66 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 MTCYBP4-201ENST00000401524 249 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.63□□□□□ -2.51
SPTA1P02549 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.63□□□□□ -2.51
SPTA1P02549 AC068587.4-201ENST00000533893 186 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AC069431.2-201ENST00000604149 1099 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
SPTA1P02549 AC091965.4-201ENST00000607691 587 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 RMST_3.1-201ENST00000611651 109 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AC016597.2-201ENST00000613256 341 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 AC112204.3-201ENST00000623822 332 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 MIR1246-201ENST00000636535 73 ntBASIC-0.63□□□□□ -2.51
SPTA1P02549 RNY1P7-201ENST00000384743 110 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 MIR563-201ENST00000385080 79 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 RNY4P36-201ENST00000391116 96 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AC091959.1-201ENST00000495857 238 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 RNA5SP216-201ENST00000516111 123 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AC109479.2-201ENST00000517842 174 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AC024405.2-202ENST00000532731 184 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.64□□□□□ -2.51
SPTA1P02549 MIR544B-201ENST00000582372 78 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AF250324.2-201ENST00000608299 610 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AC068137.4-201ENST00000638485 296 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.64□□□□□ -2.51
SPTA1P02549 SNORD45.3-201ENST00000363836 72 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 MIR125B2-201ENST00000385128 89 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.64□□□□□ -2.51
SPTA1P02549 AC012306.1-201ENST00000423267 114 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 MTATP6P17-201ENST00000431030 672 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 POLR2KP2-201ENST00000438155 177 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 SNORD65B-201ENST00000459126 73 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 RNU7-51P-201ENST00000516560 62 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.64□□□□□ -2.51
SPTA1P02549 AC090616.2-202ENST00000584248 222 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.64□□□□□ -2.51
SPTA1P02549 AL662814.1-201ENST00000617364 121 ntBASIC-0.64□□□□□ -2.51
SPTA1P02549 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 RNU6-190P-201ENST00000384154 102 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 SNORA36A-201ENST00000384221 132 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 AL365184.2-201ENST00000431139 435 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 SCARNA18-201ENST00000459004 134 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 RNU7-172P-201ENST00000517125 64 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 AC090572.1-201ENST00000519251 160 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.65□□□□□ -2.51
SPTA1P02549 MIR548AR-201ENST00000582191 57 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 OR4H6P-202ENST00000603819 340 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 SNORA70.25-201ENST00000612741 95 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 U8.17-201ENST00000391292 132 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 MTCO1P17-201ENST00000411522 491 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.65□□□□□ -2.51
SPTA1P02549 SNORA18.4-201ENST00000516440 124 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 MIR548AC-201ENST00000585049 88 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 AC087683.1-201ENST00000591187 441 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 BNIP3P40-201ENST00000596017 556 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 AC124016.2-201ENST00000610058 665 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 AL590491.3-201ENST00000610731 82 ntBASIC-0.65□□□□□ -2.51
SPTA1P02549 MIR586-201ENST00000385035 97 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms