Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 Y_RNA.240-201ENST00000364469 95 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 RNU6-131P-201ENST00000391144 107 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 FO393413.1-201ENST00000402892 195 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
COL2A1P02458 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.91□□□□□ -2.1
COL2A1P02458 RPL26P9-201ENST00000457466 433 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.91□□□□□ -2.1
COL2A1P02458 AC091179.3-201ENST00000474761 144 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 AC016632.1-201ENST00000503994 196 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.91□□□□□ -2.1
COL2A1P02458 RNU6-191P-201ENST00000516295 94 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.91□□□□□ -2.1
COL2A1P02458 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.91□□□□□ -2.1
COL2A1P02458 AL138963.2-201ENST00000605137 226 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 AC073349.3-201ENST00000617616 186 ntBASIC1.91□□□□□ -2.1
COL2A1P02458 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL2A1P02458 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.9□□□□□ -2.1
COL2A1P02458 RNU6-799P-201ENST00000363567 107 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 SNORD56.5-201ENST00000364281 72 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 RNU6-1141P-201ENST00000364520 107 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 SNORD114-22-201ENST00000365423 72 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 Y_RNA.497-201ENST00000384447 98 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 SNORA20-201ENST00000384662 132 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 MIR208B-201ENST00000401172 77 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 POLR2J4-204ENST00000418424 324 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 RAB28P5-201ENST00000427490 651 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.9□□□□□ -2.11
COL2A1P02458 AC006026.2-201ENST00000457376 180 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 RPL30P5-201ENST00000494923 336 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 SEM1P1-201ENST00000506694 209 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 ACA59.2-201ENST00000517061 156 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL2A1P02458 MIR5571-201ENST00000577998 113 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 AC091895.1-201ENST00000624494 256 ntBASIC1.9□□□□□ -2.11
COL2A1P02458 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL2A1P02458 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL2A1P02458 UBE2WP1-201ENST00000362030 340 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 RNU6-653P-201ENST00000363074 106 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 Y_RNA.182-201ENST00000363880 111 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 Y_RNA.217-201ENST00000364214 105 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 Y_RNA.262-201ENST00000364641 102 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 SNORA14A-201ENST00000364773 135 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 Y_RNA.415-201ENST00000384012 112 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 MIR1323-201ENST00000408090 73 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 RNA5SP475-201ENST00000410568 110 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AC023141.4-201ENST00000412031 328 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.89□□□□□ -2.11
COL2A1P02458 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 BPY2DP-201ENST00000422208 265 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.89□□□□□ -2.11
COL2A1P02458 SEPT7P4-201ENST00000437076 306 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 HMGN2P10-201ENST00000448085 265 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 ATP5J2P3-201ENST00000451550 258 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AC005042.3-201ENST00000453230 174 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 Y_RNA.641-201ENST00000459414 105 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 Y_RNA.637-201ENST00000459424 114 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 COX6CP14-201ENST00000469580 174 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 RNU1-117P-201ENST00000517041 158 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AC011604.1-201ENST00000545978 196 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AC024614.2-201ENST00000577584 372 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AP001485.1-201ENST00000604799 199 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AL365222.1-201ENST00000614661 98 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
COL2A1P02458 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COL2A1P02458 Y_RNA.136-201ENST00000363444 102 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-151P-201ENST00000364158 107 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-454P-201ENST00000364292 107 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 Y_RNA.272-201ENST00000364696 102 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-53P-201ENST00000365367 106 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU2-49P-201ENST00000410666 184 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RPL26P27-201ENST00000414397 437 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 SNORD2.1-201ENST00000458762 69 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.88□□□□□ -2.11
COL2A1P02458 RNU5F-2P-201ENST00000516066 82 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNA5SP468-201ENST00000516782 93 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
COL2A1P02458 HSPE1P7-201ENST00000604681 321 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.88□□□□□ -2.11
COL2A1P02458 SNORD98-201ENST00000636377 67 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL2A1P02458 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL2A1P02458 AC110491.1-201ENST00000562191 2010 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU4-13P-201ENST00000364019 141 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 Y_RNA.412-201ENST00000384001 104 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-793P-201ENST00000384233 104 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 Y_RNA.571-201ENST00000384753 98 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-763P-201ENST00000390865 106 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 MIR888-201ENST00000401186 77 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 CBX3P9-201ENST00000402326 552 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 AC004866.1-201ENST00000411748 78 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 HMGN1P7-201ENST00000491722 313 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-436P-201ENST00000516171 114 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 RNU6-426P-201ENST00000516464 97 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 SNORD116-25-201ENST00000516517 92 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms