Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU7-180P-201ENST00000459240 63 ntBASIC0□□□□□ -2.41
COL1A1P02452 RPS3AP17-201ENST00000472594 777 ntBASIC0□□□□□ -2.41
COL1A1P02452 MTND1P22-201ENST00000510572 951 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNU7-41P-201ENST00000515917 61 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNA5SP20-201ENST00000515976 84 ntBASIC0□□□□□ -2.41
COL1A1P02452 RNU6-189P-201ENST00000516120 101 ntBASIC0□□□□□ -2.41
COL1A1P02452 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0□□□□□ -2.41
COL1A1P02452 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0□□□□□ -2.41
COL1A1P02452 AC106754.1-201ENST00000562632 1513 ntBASIC0□□□□□ -2.41
COL1A1P02452 MIR3684-201ENST00000579779 74 ntBASIC0□□□□□ -2.41
COL1A1P02452 AC072046.2-201ENST00000618366 268 ntBASIC0□□□□□ -2.41
COL1A1P02452 AC005609.4-201ENST00000625071 447 ntBASIC0□□□□□ -2.41
COL1A1P02452 AP000720.1-201ENST00000625091 483 ntBASIC0□□□□□ -2.41
COL1A1P02452 MIR18A-201ENST00000362310 71 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-873P-201ENST00000363833 107 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU4-9P-201ENST00000364951 139 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 SNORD49B-201ENST00000365172 72 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-996P-201ENST00000365438 107 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 SNORA20B-201ENST00000384220 132 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 SNORA2B-201ENST00000384583 137 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 MIR520F-201ENST00000384824 87 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-679P-201ENST00000391003 106 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-325P-201ENST00000411132 105 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 MTATP6P18-201ENST00000417994 673 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 MTCYBP8-201ENST00000422855 651 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL1A1P02452 PIGPP3-201ENST00000425307 415 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 AL392103.1-201ENST00000447000 198 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 PCNPP5-201ENST00000452246 481 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL1A1P02452 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL1A1P02452 MTCO1P29-201ENST00000496868 288 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-863P-201ENST00000515989 104 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU7-43P-201ENST00000516554 64 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 RNU6-107P-201ENST00000516643 102 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL1A1P02452 MIR4431-201ENST00000579990 94 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 MIR5583-1-201ENST00000580941 59 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 AC090616.2-202ENST00000584248 222 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 AL357078.3-201ENST00000607528 618 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 AC016597.2-201ENST00000613256 341 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 uc_338.6-201ENST00000613544 171 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 AL008636.1-201ENST00000625038 1018 ntBASIC-0.01□□□□□ -2.41
COL1A1P02452 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL1A1P02452 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 SNORD115-32-201ENST00000364079 82 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 RNU6-46P-201ENST00000383860 107 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 RNY3P9-201ENST00000384727 106 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 MIR635-201ENST00000384830 98 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 MIR520G-201ENST00000385064 90 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 RNA5SP95-201ENST00000410319 137 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 RNU6-584P-201ENST00000410350 95 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 SNORD83.1-201ENST00000411362 77 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL1A1P02452 AL359672.1-201ENST00000442302 409 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL1A1P02452 SNORD11.1-201ENST00000459482 85 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AC114811.1-201ENST00000507207 168 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL1A1P02452 RN7SKP164-201ENST00000516138 266 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL1A1P02452 AL158211.1-201ENST00000566763 763 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 MIR3678-201ENST00000578455 94 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AC120024.3-201ENST00000603167 156 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AC004223.4-201ENST00000612426 332 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AL354950.2-201ENST00000617939 290 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AC103705.1-201ENST00000619013 241 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 AL158209.2-201ENST00000619266 216 ntBASIC-0.02□□□□□ -2.41
COL1A1P02452 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
COL1A1P02452 SNORD68-201ENST00000363214 84 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 RNU6-407P-201ENST00000365280 104 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 MIR573-201ENST00000384964 99 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL1A1P02452 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.03□□□□□ -2.41
COL1A1P02452 AC243428.1-201ENST00000421099 264 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 MTCO3P10-201ENST00000455912 772 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 RNU7-63P-201ENST00000459054 62 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 snoU13.21-201ENST00000459368 105 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL1A1P02452 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL1A1P02452 SNORA18.7-201ENST00000516910 131 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AC091144.1-201ENST00000519573 138 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL1A1P02452 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL1A1P02452 AC100830.2-201ENST00000581636 240 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 SNORA25.18-201ENST00000607153 114 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AC007684.1-201ENST00000609671 477 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AL158063.1-201ENST00000615349 536 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AC009248.2-201ENST00000619826 254 ntBASIC-0.03□□□□□ -2.41
COL1A1P02452 AC022306.3-201ENST00000619930 550 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms