Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
VAPBO95292 Y_RNA.231-201ENST00000364358 102 ntBASIC0.22□□□□□ -2.37
VAPBO95292 RNU6-648P-201ENST00000410190 107 ntBASIC0.22□□□□□ -2.37
VAPBO95292 Y_RNA.621-201ENST00000411065 96 ntBASIC0.22□□□□□ -2.37
VAPBO95292 RNU6-177P-201ENST00000411257 104 ntBASIC0.22□□□□□ -2.37
VAPBO95292 AL590632.1-201ENST00000424289 371 ntBASIC0.22□□□□□ -2.37
VAPBO95292 USMG5P1-201ENST00000425964 177 ntBASIC0.22□□□□□ -2.37
VAPBO95292 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.22□□□□□ -2.37
VAPBO95292 RNU7-43P-201ENST00000516554 64 ntBASIC0.22□□□□□ -2.37
VAPBO95292 RNU6-835P-201ENST00000516974 104 ntBASIC0.22□□□□□ -2.37
VAPBO95292 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.22□□□□□ -2.37
VAPBO95292 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
VAPBO95292 AC073114.1-201ENST00000612027 490 ntBASIC0.22□□□□□ -2.37
VAPBO95292 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.22□□□□□ -2.37
VAPBO95292 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
VAPBO95292 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
VAPBO95292 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
VAPBO95292 Y_RNA.112-201ENST00000363250 102 ntBASIC0.21□□□□□ -2.38
VAPBO95292 RNU6-654P-201ENST00000364373 107 ntBASIC0.21□□□□□ -2.38
VAPBO95292 Y_RNA.393-201ENST00000383936 102 ntBASIC0.21□□□□□ -2.38
VAPBO95292 MIR873-201ENST00000401120 77 ntBASIC0.21□□□□□ -2.38
VAPBO95292 AC005534.2-201ENST00000431047 433 ntBASIC0.21□□□□□ -2.38
VAPBO95292 UQCRBP2-201ENST00000447827 297 ntBASIC0.21□□□□□ -2.38
VAPBO95292 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.21□□□□□ -2.38
VAPBO95292 AC074133.1-201ENST00000515696 183 ntBASIC0.21□□□□□ -2.38
VAPBO95292 RNU6-1114P-201ENST00000516022 107 ntBASIC0.21□□□□□ -2.38
VAPBO95292 Y_RNA.695-201ENST00000516715 107 ntBASIC0.21□□□□□ -2.38
VAPBO95292 MIR4764-201ENST00000580680 88 ntBASIC0.21□□□□□ -2.38
VAPBO95292 RN7SL793P-201ENST00000583259 296 ntBASIC0.21□□□□□ -2.38
VAPBO95292 AC019193.3-201ENST00000609144 554 ntBASIC0.21□□□□□ -2.38
VAPBO95292 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.21□□□□□ -2.38
VAPBO95292 PVT1_3.1-201ENST00000620853 95 ntBASIC0.21□□□□□ -2.38
VAPBO95292 AC008133.2-201ENST00000624540 351 ntBASIC0.21□□□□□ -2.38
VAPBO95292 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VAPBO95292 Y_RNA.372-201ENST00000365599 102 ntBASIC0.2□□□□□ -2.38
VAPBO95292 RNU6-281P-201ENST00000384212 103 ntBASIC0.2□□□□□ -2.38
VAPBO95292 SNORA2B-201ENST00000384583 137 ntBASIC0.2□□□□□ -2.38
VAPBO95292 RNU6-136P-201ENST00000384663 107 ntBASIC0.2□□□□□ -2.38
VAPBO95292 MIR1302-7-201ENST00000408841 72 ntBASIC0.2□□□□□ -2.38
VAPBO95292 RNU6-1304P-201ENST00000411374 106 ntBASIC0.2□□□□□ -2.38
VAPBO95292 USP9YP16-201ENST00000430287 407 ntBASIC0.2□□□□□ -2.38
VAPBO95292 AL392103.1-201ENST00000447000 198 ntBASIC0.2□□□□□ -2.38
VAPBO95292 USP9YP23-201ENST00000455085 407 ntBASIC0.2□□□□□ -2.38
VAPBO95292 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
VAPBO95292 SNORA18.7-201ENST00000516910 131 ntBASIC0.2□□□□□ -2.38
VAPBO95292 AC093023.1-201ENST00000547375 507 ntBASIC0.2□□□□□ -2.38
VAPBO95292 MIR5696-201ENST00000578474 85 ntBASIC0.2□□□□□ -2.38
VAPBO95292 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.2□□□□□ -2.38
VAPBO95292 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
VAPBO95292 ELOCP21-201ENST00000412558 336 ntBASIC0.19□□□□□ -2.38
VAPBO95292 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.19□□□□□ -2.38
VAPBO95292 ERLEC1P1-201ENST00000433806 578 ntBASIC0.19□□□□□ -2.38
VAPBO95292 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
VAPBO95292 SUMO1P2-201ENST00000452524 304 ntBASIC0.19□□□□□ -2.38
VAPBO95292 RNU6-956P-201ENST00000458868 103 ntBASIC0.19□□□□□ -2.38
VAPBO95292 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.19□□□□□ -2.38
VAPBO95292 Y_RNA.706-201ENST00000516933 99 ntBASIC0.19□□□□□ -2.38
VAPBO95292 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.19□□□□□ -2.38
VAPBO95292 AC011712.1-201ENST00000588959 234 ntBASIC0.19□□□□□ -2.38
VAPBO95292 AC124303.1-201ENST00000605703 360 ntBASIC0.19□□□□□ -2.38
VAPBO95292 RNU6-89P-201ENST00000606519 100 ntBASIC0.19□□□□□ -2.38
VAPBO95292 AC092954.2-201ENST00000609103 430 ntBASIC0.19□□□□□ -2.38
VAPBO95292 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.19□□□□□ -2.38
VAPBO95292 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.18□□□□□ -2.38
VAPBO95292 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
VAPBO95292 Y_RNA.409-201ENST00000383990 98 ntBASIC0.18□□□□□ -2.38
VAPBO95292 MTATP6P13-201ENST00000438531 667 ntBASIC0.18□□□□□ -2.38
VAPBO95292 LRRC34P1-201ENST00000542742 915 ntBASIC0.18□□□□□ -2.38
VAPBO95292 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.18□□□□□ -2.38
VAPBO95292 ZNF519P2-201ENST00000557032 169 ntBASIC0.18□□□□□ -2.38
VAPBO95292 MIR3908-201ENST00000579798 126 ntBASIC0.18□□□□□ -2.38
VAPBO95292 MIR4273-201ENST00000582824 84 ntBASIC0.18□□□□□ -2.38
VAPBO95292 U6.115-201ENST00000636045 103 ntBASIC0.18□□□□□ -2.38
VAPBO95292 RNU6-222P-201ENST00000362438 107 ntBASIC0.17□□□□□ -2.38
VAPBO95292 U8.5-201ENST00000364528 136 ntBASIC0.17□□□□□ -2.38
VAPBO95292 Y_RNA.405-201ENST00000383979 100 ntBASIC0.17□□□□□ -2.38
VAPBO95292 Y_RNA.451-201ENST00000384200 100 ntBASIC0.17□□□□□ -2.38
VAPBO95292 Y_RNA.524-201ENST00000384564 100 ntBASIC0.17□□□□□ -2.38
VAPBO95292 Y_RNA.561-201ENST00000384694 100 ntBASIC0.17□□□□□ -2.38
VAPBO95292 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
VAPBO95292 RNA5SP95-201ENST00000410319 137 ntBASIC0.17□□□□□ -2.38
VAPBO95292 MTND3P23-201ENST00000431980 347 ntBASIC0.17□□□□□ -2.38
VAPBO95292 RNU6-63P-201ENST00000516690 95 ntBASIC0.17□□□□□ -2.38
VAPBO95292 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.17□□□□□ -2.38
VAPBO95292 AC090617.3-201ENST00000573670 475 ntBASIC0.17□□□□□ -2.38
VAPBO95292 AC104695.3-201ENST00000604052 296 ntBASIC0.17□□□□□ -2.38
VAPBO95292 AC005828.6-201ENST00000606610 232 ntBASIC0.17□□□□□ -2.38
VAPBO95292 AL355073.2-201ENST00000612106 557 ntBASIC0.17□□□□□ -2.38
VAPBO95292 AL357075.2-201ENST00000614906 189 ntBASIC0.17□□□□□ -2.38
VAPBO95292 RNU6-369P-201ENST00000362515 102 ntBASIC0.16□□□□□ -2.38
VAPBO95292 RNU4-45P-201ENST00000365469 141 ntBASIC0.16□□□□□ -2.38
VAPBO95292 Y_RNA.373-201ENST00000365600 103 ntBASIC0.16□□□□□ -2.38
VAPBO95292 AC117470.1-201ENST00000381974 330 ntBASIC0.16□□□□□ -2.38
VAPBO95292 MIR573-201ENST00000384964 99 ntBASIC0.16□□□□□ -2.38
VAPBO95292 RNA5SP511-201ENST00000410487 115 ntBASIC0.16□□□□□ -2.38
VAPBO95292 RNU6-1001P-201ENST00000411265 100 ntBASIC0.16□□□□□ -2.38
VAPBO95292 MTND1P4-201ENST00000435196 415 ntBASIC0.16□□□□□ -2.38
VAPBO95292 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.16□□□□□ -2.38
VAPBO95292 MIR4762-201ENST00000585261 75 ntBASIC0.16□□□□□ -2.38
VAPBO95292 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms