Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 UQCRBP2-201ENST00000447827 297 ntBASIC0.41□□□□□ -2.34
SNX4O95219 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.41□□□□□ -2.34
SNX4O95219 MIR6863-201ENST00000636112 90 ntBASIC0.41□□□□□ -2.34
SNX4O95219 SNORD68-201ENST00000363214 84 ntBASIC0.4□□□□□ -2.35
SNX4O95219 RNU6-596P-201ENST00000365395 98 ntBASIC0.4□□□□□ -2.35
SNX4O95219 RNU6-117P-201ENST00000365415 107 ntBASIC0.4□□□□□ -2.35
SNX4O95219 SNORD14.1-201ENST00000365609 90 ntBASIC0.4□□□□□ -2.35
SNX4O95219 RNU6-1042P-201ENST00000384204 107 ntBASIC0.4□□□□□ -2.35
SNX4O95219 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
SNX4O95219 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
SNX4O95219 Y_RNA.530-201ENST00000384587 101 ntBASIC0.4□□□□□ -2.35
SNX4O95219 Y_RNA.553-201ENST00000384670 102 ntBASIC0.4□□□□□ -2.35
SNX4O95219 MIR136-201ENST00000385207 82 ntBASIC0.4□□□□□ -2.35
SNX4O95219 MIR1298-201ENST00000408783 112 ntBASIC0.4□□□□□ -2.35
SNX4O95219 RNU6-1068P-201ENST00000410958 103 ntBASIC0.4□□□□□ -2.35
SNX4O95219 MTND3P23-201ENST00000431980 347 ntBASIC0.4□□□□□ -2.35
SNX4O95219 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.4□□□□□ -2.35
SNX4O95219 AC114811.1-201ENST00000507207 168 ntBASIC0.4□□□□□ -2.35
SNX4O95219 Y_RNA.706-201ENST00000516933 99 ntBASIC0.4□□□□□ -2.35
SNX4O95219 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.4□□□□□ -2.35
SNX4O95219 AC100812.1-201ENST00000607622 580 ntBASIC0.4□□□□□ -2.35
SNX4O95219 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.4□□□□□ -2.35
SNX4O95219 ZNF299P-201ENST00000406845 1804 ntBASIC0.4□□□□□ -2.35
SNX4O95219 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
SNX4O95219 SNORD114-7-201ENST00000362520 77 ntBASIC0.39□□□□□ -2.35
SNX4O95219 SNORA25.3-201ENST00000363205 127 ntBASIC0.39□□□□□ -2.35
SNX4O95219 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
SNX4O95219 RNA5SP222-201ENST00000411039 105 ntBASIC0.39□□□□□ -2.35
SNX4O95219 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
SNX4O95219 AC074133.1-201ENST00000515696 183 ntBASIC0.39□□□□□ -2.35
SNX4O95219 Y_RNA.665-201ENST00000516177 98 ntBASIC0.39□□□□□ -2.35
SNX4O95219 RNU7-43P-201ENST00000516554 64 ntBASIC0.39□□□□□ -2.35
SNX4O95219 AF235103.2-201ENST00000525753 346 ntBASIC0.39□□□□□ -2.35
SNX4O95219 AC036111.3-201ENST00000526389 112 ntBASIC0.39□□□□□ -2.35
SNX4O95219 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.39□□□□□ -2.35
SNX4O95219 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
SNX4O95219 DISC2.1-201ENST00000612827 205 ntBASIC0.39□□□□□ -2.35
SNX4O95219 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
SNX4O95219 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.39□□□□□ -2.35
SNX4O95219 MIR6516-201ENST00000630554 81 ntBASIC0.39□□□□□ -2.35
SNX4O95219 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SNX4O95219 U8.5-201ENST00000364528 136 ntBASIC0.38□□□□□ -2.35
SNX4O95219 Y_RNA.372-201ENST00000365599 102 ntBASIC0.38□□□□□ -2.35
SNX4O95219 RNU6-1297P-201ENST00000384415 104 ntBASIC0.38□□□□□ -2.35
SNX4O95219 MIR613-201ENST00000385248 95 ntBASIC0.38□□□□□ -2.35
SNX4O95219 SNORD105-201ENST00000386910 85 ntBASIC0.38□□□□□ -2.35
SNX4O95219 RNA5SP193-201ENST00000410353 107 ntBASIC0.38□□□□□ -2.35
SNX4O95219 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.38□□□□□ -2.35
SNX4O95219 Y_RNA.693-201ENST00000516641 110 ntBASIC0.38□□□□□ -2.35
SNX4O95219 RNU6-256P-201ENST00000516747 97 ntBASIC0.38□□□□□ -2.35
SNX4O95219 AC023442.1-201ENST00000531247 422 ntBASIC0.38□□□□□ -2.35
SNX4O95219 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.38□□□□□ -2.35
SNX4O95219 RNU6-94P-201ENST00000607728 107 ntBASIC0.38□□□□□ -2.35
SNX4O95219 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
SNX4O95219 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.38□□□□□ -2.35
SNX4O95219 PVT1_3.1-201ENST00000620853 95 ntBASIC0.38□□□□□ -2.35
SNX4O95219 MIR410-201ENST00000362222 80 ntBASIC0.37□□□□□ -2.35
SNX4O95219 RNU6-1252P-201ENST00000363054 104 ntBASIC0.37□□□□□ -2.35
SNX4O95219 Y_RNA.112-201ENST00000363250 102 ntBASIC0.37□□□□□ -2.35
SNX4O95219 Y_RNA.135-201ENST00000363439 95 ntBASIC0.37□□□□□ -2.35
SNX4O95219 RNU6-595P-201ENST00000363944 107 ntBASIC0.37□□□□□ -2.35
SNX4O95219 SNORD113.3-201ENST00000364630 78 ntBASIC0.37□□□□□ -2.35
SNX4O95219 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
SNX4O95219 MIR1827-201ENST00000408549 66 ntBASIC0.37□□□□□ -2.35
SNX4O95219 ELOCP21-201ENST00000412558 336 ntBASIC0.37□□□□□ -2.35
SNX4O95219 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.37□□□□□ -2.35
SNX4O95219 RNU7-41P-201ENST00000515917 61 ntBASIC0.37□□□□□ -2.35
SNX4O95219 RN7SKP164-201ENST00000516138 266 ntBASIC0.37□□□□□ -2.35
SNX4O95219 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.37□□□□□ -2.35
SNX4O95219 AC010525.2-201ENST00000590920 195 ntBASIC0.37□□□□□ -2.35
SNX4O95219 AC119751.7-201ENST00000600494 245 ntBASIC0.37□□□□□ -2.35
SNX4O95219 U6.115-201ENST00000636045 103 ntBASIC0.37□□□□□ -2.35
SNX4O95219 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.36□□□□□ -2.35
SNX4O95219 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
SNX4O95219 Y_RNA.533-201ENST00000384596 114 ntBASIC0.36□□□□□ -2.35
SNX4O95219 MTCO3P40-201ENST00000392516 676 ntBASIC0.36□□□□□ -2.35
SNX4O95219 MTND4LP16-201ENST00000440828 295 ntBASIC0.36□□□□□ -2.35
SNX4O95219 AL512360.1-201ENST00000555346 234 ntBASIC0.36□□□□□ -2.35
SNX4O95219 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
SNX4O95219 MIR4762-201ENST00000585261 75 ntBASIC0.36□□□□□ -2.35
SNX4O95219 AC005828.6-201ENST00000606610 232 ntBASIC0.36□□□□□ -2.35
SNX4O95219 AC007742.2-201ENST00000618226 398 ntBASIC0.36□□□□□ -2.35
SNX4O95219 MIR7111-201ENST00000619751 72 ntBASIC0.36□□□□□ -2.35
SNX4O95219 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
SNX4O95219 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SNX4O95219 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
SNX4O95219 AC117470.1-201ENST00000381974 330 ntBASIC0.35□□□□□ -2.35
SNX4O95219 RNU6-1001P-201ENST00000411265 100 ntBASIC0.35□□□□□ -2.35
SNX4O95219 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
SNX4O95219 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
SNX4O95219 AL162413.1-201ENST00000603198 110 ntBASIC0.35□□□□□ -2.35
SNX4O95219 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.35
SNX4O95219 SNORD114-23-201ENST00000363536 72 ntBASIC0.34□□□□□ -2.36
SNX4O95219 Y_RNA.393-201ENST00000383936 102 ntBASIC0.34□□□□□ -2.36
SNX4O95219 Y_RNA.498-201ENST00000384460 102 ntBASIC0.34□□□□□ -2.36
SNX4O95219 RNU6-136P-201ENST00000384663 107 ntBASIC0.34□□□□□ -2.36
SNX4O95219 Y_RNA.615-201ENST00000410769 117 ntBASIC0.34□□□□□ -2.36
SNX4O95219 MRPS18CP6-201ENST00000423587 223 ntBASIC0.34□□□□□ -2.36
SNX4O95219 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
SNX4O95219 MTND5P16-201ENST00000460269 1703 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms