Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL080274.1-201ENST00000605565 220 ntBASIC1.74□□□□□ -2.13
RTN3O95197 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
RTN3O95197 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RTN3O95197 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
RTN3O95197 Y_RNA.112-201ENST00000363250 102 ntBASIC1.73□□□□□ -2.13
RTN3O95197 Y_RNA.124-201ENST00000363339 93 ntBASIC1.73□□□□□ -2.13
RTN3O95197 RNU6-626P-201ENST00000363354 107 ntBASIC1.73□□□□□ -2.13
RTN3O95197 RNU6-457P-201ENST00000363999 107 ntBASIC1.73□□□□□ -2.13
RTN3O95197 SNORD115-30-201ENST00000364117 82 ntBASIC1.73□□□□□ -2.13
RTN3O95197 Y_RNA.230-201ENST00000364348 109 ntBASIC1.73□□□□□ -2.13
RTN3O95197 Y_RNA.361-201ENST00000365515 120 ntBASIC1.73□□□□□ -2.13
RTN3O95197 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
RTN3O95197 RNU2-54P-201ENST00000410299 190 ntBASIC1.73□□□□□ -2.13
RTN3O95197 BTF3P4-201ENST00000418852 495 ntBASIC1.73□□□□□ -2.13
RTN3O95197 AL160004.2-201ENST00000432935 350 ntBASIC1.73□□□□□ -2.13
RTN3O95197 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
RTN3O95197 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.73□□□□□ -2.13
RTN3O95197 MIR5188-201ENST00000583467 113 ntBASIC1.73□□□□□ -2.13
RTN3O95197 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.73□□□□□ -2.13
RTN3O95197 AL162424.1-201ENST00000602325 221 ntBASIC1.73□□□□□ -2.13
RTN3O95197 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.73□□□□□ -2.13
RTN3O95197 AC021506.2-201ENST00000612354 169 ntBASIC1.73□□□□□ -2.13
RTN3O95197 AC127459.3-201ENST00000624328 466 ntBASIC1.73□□□□□ -2.13
RTN3O95197 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
RTN3O95197 RNU6-1123P-201ENST00000362347 106 ntBASIC1.72□□□□□ -2.13
RTN3O95197 SNORD33-201ENST00000362761 85 ntBASIC1.72□□□□□ -2.13
RTN3O95197 Y_RNA.509-201ENST00000384506 99 ntBASIC1.72□□□□□ -2.13
RTN3O95197 AL034345.1-201ENST00000407768 123 ntBASIC1.72□□□□□ -2.13
RTN3O95197 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
RTN3O95197 AC005840.1-201ENST00000498412 377 ntBASIC1.72□□□□□ -2.13
RTN3O95197 AC015688.6-201ENST00000577737 104 ntBASIC1.72□□□□□ -2.13
RTN3O95197 RPS29P30-201ENST00000600975 111 ntBASIC1.72□□□□□ -2.13
RTN3O95197 AL390123.1-201ENST00000603216 237 ntBASIC1.72□□□□□ -2.13
RTN3O95197 AC006026.1-201ENST00000444025 1803 ntBASIC1.72□□□□□ -2.13
RTN3O95197 Y_RNA.101-201ENST00000363154 102 ntBASIC1.71□□□□□ -2.14
RTN3O95197 RNU6-117P-201ENST00000365415 107 ntBASIC1.71□□□□□ -2.14
RTN3O95197 Y_RNA.466-201ENST00000384294 113 ntBASIC1.71□□□□□ -2.14
RTN3O95197 Y_RNA.526-201ENST00000384572 110 ntBASIC1.71□□□□□ -2.14
RTN3O95197 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
RTN3O95197 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.71□□□□□ -2.14
RTN3O95197 RNU6-341P-201ENST00000516973 96 ntBASIC1.71□□□□□ -2.14
RTN3O95197 C8orf59P2-201ENST00000603441 271 ntBASIC1.71□□□□□ -2.14
RTN3O95197 SNORA28-201ENST00000606769 126 ntBASIC1.71□□□□□ -2.14
RTN3O95197 AC006157.1-201ENST00000611750 366 ntBASIC1.71□□□□□ -2.14
RTN3O95197 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.71□□□□□ -2.14
RTN3O95197 AC010205.1-201ENST00000616668 449 ntBASIC1.71□□□□□ -2.14
RTN3O95197 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.71□□□□□ -2.14
RTN3O95197 Y_RNA.796-201ENST00000364268 102 ntBASIC1.7□□□□□ -2.14
RTN3O95197 SNORD1A-201ENST00000364968 72 ntBASIC1.7□□□□□ -2.14
RTN3O95197 Y_RNA.799-201ENST00000364992 102 ntBASIC1.7□□□□□ -2.14
RTN3O95197 SNORA25.9-201ENST00000365087 128 ntBASIC1.7□□□□□ -2.14
RTN3O95197 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.7□□□□□ -2.14
RTN3O95197 Y_RNA.395-201ENST00000383945 109 ntBASIC1.7□□□□□ -2.14
RTN3O95197 RNY1P14-201ENST00000384426 108 ntBASIC1.7□□□□□ -2.14
RTN3O95197 RN7SKP51-201ENST00000410781 304 ntBASIC1.7□□□□□ -2.14
RTN3O95197 AC091021.1-201ENST00000468051 388 ntBASIC1.7□□□□□ -2.14
RTN3O95197 AC079140.2-201ENST00000506193 142 ntBASIC1.7□□□□□ -2.14
RTN3O95197 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
RTN3O95197 AC091178.2-201ENST00000584401 117 ntBASIC1.7□□□□□ -2.14
RTN3O95197 AL121655.1-201ENST00000605811 308 ntBASIC1.7□□□□□ -2.14
RTN3O95197 Y_RNA.772-201ENST00000606692 102 ntBASIC1.7□□□□□ -2.14
RTN3O95197 SNORD58B-201ENST00000607313 66 ntBASIC1.7□□□□□ -2.14
RTN3O95197 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
RTN3O95197 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
RTN3O95197 MIR520G-201ENST00000385064 90 ntBASIC1.69□□□□□ -2.14
RTN3O95197 MIR513A1-201ENST00000385138 129 ntBASIC1.69□□□□□ -2.14
RTN3O95197 AL031003.1-201ENST00000404229 172 ntBASIC1.69□□□□□ -2.14
RTN3O95197 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
RTN3O95197 PGBD4P5-201ENST00000445958 426 ntBASIC1.69□□□□□ -2.14
RTN3O95197 AL163540.1-201ENST00000485382 386 ntBASIC1.69□□□□□ -2.14
RTN3O95197 RNU6-475P-201ENST00000516073 104 ntBASIC1.69□□□□□ -2.14
RTN3O95197 RNU6-155P-201ENST00000516347 100 ntBASIC1.69□□□□□ -2.14
RTN3O95197 RNU2-56P-201ENST00000516826 190 ntBASIC1.69□□□□□ -2.14
RTN3O95197 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.69□□□□□ -2.14
RTN3O95197 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.69□□□□□ -2.14
RTN3O95197 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
RTN3O95197 AL359821.1-201ENST00000605519 182 ntBASIC1.69□□□□□ -2.14
RTN3O95197 AL050343.2-201ENST00000607338 280 ntBASIC1.69□□□□□ -2.14
RTN3O95197 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RTN3O95197 AC090971.5-201ENST00000621102 293 ntBASIC1.69□□□□□ -2.14
RTN3O95197 uc_338.22-201ENST00000622722 187 ntBASIC1.69□□□□□ -2.14
RTN3O95197 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RTN3O95197 RNY1P10-201ENST00000363268 113 ntBASIC1.68□□□□□ -2.14
RTN3O95197 Y_RNA.267-201ENST00000364679 109 ntBASIC1.68□□□□□ -2.14
RTN3O95197 SNORD42.2-201ENST00000365570 69 ntBASIC1.68□□□□□ -2.14
RTN3O95197 Y_RNA.419-201ENST00000384041 102 ntBASIC1.68□□□□□ -2.14
RTN3O95197 Y_RNA.446-201ENST00000384178 104 ntBASIC1.68□□□□□ -2.14
RTN3O95197 RNU6-505P-201ENST00000384427 107 ntBASIC1.68□□□□□ -2.14
RTN3O95197 STAG3L5P-204ENST00000443759 179 ntBASIC1.68□□□□□ -2.14
RTN3O95197 HSPE1P13-201ENST00000451143 297 ntBASIC1.68□□□□□ -2.14
RTN3O95197 Y_RNA.639-201ENST00000458981 102 ntBASIC1.68□□□□□ -2.14
RTN3O95197 AC093852.1-201ENST00000503587 266 ntBASIC1.68□□□□□ -2.14
RTN3O95197 RN7SKP295-201ENST00000517264 153 ntBASIC1.68□□□□□ -2.14
RTN3O95197 AC022441.3-201ENST00000605737 136 ntBASIC1.68□□□□□ -2.14
RTN3O95197 AL021879.1-201ENST00000611756 288 ntBASIC1.68□□□□□ -2.14
RTN3O95197 AC040896.1-201ENST00000613819 479 ntBASIC1.68□□□□□ -2.14
RTN3O95197 AL513423.1-201ENST00000621695 132 ntBASIC1.68□□□□□ -2.14
RTN3O95197 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
RTN3O95197 Y_RNA.122-201ENST00000363331 96 ntBASIC1.67□□□□□ -2.14
RTN3O95197 RNU6-324P-201ENST00000363957 106 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms