Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC104072.1-201ENST00000568817 668 ntBASIC-1.41□□□□□ -2.63
LTN1O94822 MIR3912-201ENST00000577566 105 ntBASIC-1.41□□□□□ -2.63
LTN1O94822 AP000907.4-201ENST00000604143 237 ntBASIC-1.41□□□□□ -2.63
LTN1O94822 AC005562.2-201ENST00000618264 111 ntBASIC-1.41□□□□□ -2.63
LTN1O94822 AC010608.3-201ENST00000625048 527 ntBASIC-1.41□□□□□ -2.63
LTN1O94822 SNORD68-201ENST00000363214 84 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 RNU7-182P-201ENST00000459009 62 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.42□□□□□ -2.64
LTN1O94822 RNU6-607P-201ENST00000411283 108 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 SNORD123-201ENST00000459473 70 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 RNU6-150P-201ENST00000516237 95 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 MIR544B-201ENST00000582372 78 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 MIR4639-201ENST00000584938 69 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 AL445435.1-201ENST00000604232 665 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 AC108747.1-201ENST00000609508 535 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.42□□□□□ -2.64
LTN1O94822 RNY4P27-201ENST00000363341 96 ntBASIC-1.43□□□□□ -2.64
LTN1O94822 RNU6-137P-201ENST00000363680 108 ntBASIC-1.43□□□□□ -2.64
LTN1O94822 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.43□□□□□ -2.64
LTN1O94822 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 RNU6-116P-201ENST00000384042 109 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 U6.112-201ENST00000384129 70 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 MIR320C1-201ENST00000408566 88 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.44□□□□□ -2.64
LTN1O94822 AC005178.1-201ENST00000508392 440 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.44□□□□□ -2.64
LTN1O94822 AL358944.1-201ENST00000528537 144 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 AC093023.1-201ENST00000547375 507 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 AC012414.2-201ENST00000559474 187 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 SUMO1P3-201ENST00000439961 304 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.44□□□□□ -2.64
LTN1O94822 snoU13.16-201ENST00000459350 104 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.44□□□□□ -2.64
LTN1O94822 AC040926.1-201ENST00000530195 238 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 FRG2DP-202ENST00000566967 323 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 AC078880.5-201ENST00000617845 421 ntBASIC-1.44□□□□□ -2.64
LTN1O94822 AC073343.1-201ENST00000328239 651 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 SNORA36A-201ENST00000384221 132 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 MIR516B1-201ENST00000385211 90 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
LTN1O94822 AC021146.9-201ENST00000512503 156 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 RNA5SP454-201ENST00000517231 127 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 AP003168.1-201ENST00000530091 307 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 MIR3115-201ENST00000577915 68 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 AC006435.5-201ENST00000624486 112 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 AC005609.4-201ENST00000625071 447 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 MTND5P17-201ENST00000418405 1603 ntBASIC-1.45□□□□□ -2.64
LTN1O94822 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 RNU6-726P-201ENST00000364680 107 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 RNU4-16P-201ENST00000364737 141 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 MIR15B-201ENST00000385045 98 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 RNU6-344P-201ENST00000516635 111 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.46□□□□□ -2.64
LTN1O94822 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.46□□□□□ -2.64
LTN1O94822 RNU6-740P-201ENST00000364734 105 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 AL031779.1-201ENST00000415663 330 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 AC092447.3-201ENST00000426027 686 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 EPS15P1-201ENST00000448836 336 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 RNU6-430P-201ENST00000517078 107 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.47□□□□□ -2.64
LTN1O94822 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.47□□□□□ -2.64
LTN1O94822 AC026470.2-201ENST00000561492 181 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.47□□□□□ -2.64
LTN1O94822 AP002782.1-201ENST00000623107 614 ntBASIC-1.47□□□□□ -2.64
LTN1O94822 SNORD114-25-201ENST00000363742 72 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 RNU4-36P-201ENST00000364294 144 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 MIR570-201ENST00000384917 97 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 RNU2-39P-201ENST00000410604 198 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 RNU7-62P-201ENST00000458856 62 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.47□□□□□ -2.65
LTN1O94822 MIR4306-201ENST00000583390 91 ntBASIC-1.47□□□□□ -2.65
LTN1O94822 RNU6-777P-201ENST00000364265 104 ntBASIC-1.48□□□□□ -2.65
LTN1O94822 RNU6-336P-201ENST00000364891 107 ntBASIC-1.48□□□□□ -2.65
LTN1O94822 RNU6-855P-201ENST00000410395 104 ntBASIC-1.48□□□□□ -2.65
LTN1O94822 AL390729.2-201ENST00000416137 156 ntBASIC-1.48□□□□□ -2.65
LTN1O94822 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.48□□□□□ -2.65
LTN1O94822 RNU7-172P-201ENST00000517125 64 ntBASIC-1.48□□□□□ -2.65
LTN1O94822 ZNF299P-201ENST00000406845 1804 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 MIR518F-201ENST00000384973 87 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 AC114491.1-201ENST00000416095 246 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.49□□□□□ -2.65
LTN1O94822 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.49□□□□□ -2.65
LTN1O94822 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.49□□□□□ -2.65
LTN1O94822 SNORA70.25-201ENST00000612741 95 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 MT-TY-201ENST00000387409 66 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 MIR876-201ENST00000401147 81 ntBASIC-1.49□□□□□ -2.65
LTN1O94822 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 387.6 ms