Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDKL5O76039 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CDKL5O76039 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDKL5O76039 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.57□□□□□ -2
CDKL5O76039 snoU2_19.4-201ENST00000364329 80 ntBASIC2.56□□□□□ -2
CDKL5O76039 SNORA68.1-201ENST00000364537 132 ntBASIC2.56□□□□□ -2
CDKL5O76039 SNORD31B-201ENST00000364977 69 ntBASIC2.56□□□□□ -2
CDKL5O76039 RNU6-1130P-201ENST00000365434 107 ntBASIC2.56□□□□□ -2
CDKL5O76039 SNORA20B-201ENST00000384220 132 ntBASIC2.56□□□□□ -2
CDKL5O76039 RNU6-975P-201ENST00000384296 105 ntBASIC2.56□□□□□ -2
CDKL5O76039 AL355497.1-201ENST00000406262 551 ntBASIC2.56□□□□□ -2
CDKL5O76039 U6atac.2-201ENST00000408644 118 ntBASIC2.56□□□□□ -2
CDKL5O76039 RNU6-57P-201ENST00000411348 103 ntBASIC2.56□□□□□ -2
CDKL5O76039 AL121890.1-201ENST00000435457 205 ntBASIC2.56□□□□□ -2
CDKL5O76039 RPL23AP7-203ENST00000449021 469 ntBASIC2.56□□□□□ -2
CDKL5O76039 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.56□□□□□ -2
CDKL5O76039 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.56□□□□□ -2
CDKL5O76039 MIR1248-201ENST00000629190 106 ntBASIC2.56□□□□□ -2
CDKL5O76039 MIR7157-201ENST00000635801 60 ntBASIC2.56□□□□□ -2
CDKL5O76039 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.56□□□□□ -2
CDKL5O76039 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDKL5O76039 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CDKL5O76039 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CDKL5O76039 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CDKL5O76039 AL596028.1-201ENST00000326971 197 ntBASIC2.55□□□□□ -2
CDKL5O76039 Y_RNA.75-201ENST00000362927 97 ntBASIC2.55□□□□□ -2
CDKL5O76039 Y_RNA.121-201ENST00000363309 113 ntBASIC2.55□□□□□ -2
CDKL5O76039 RNU6-899P-201ENST00000363947 107 ntBASIC2.55□□□□□ -2
CDKL5O76039 Y_RNA.272-201ENST00000364696 102 ntBASIC2.55□□□□□ -2
CDKL5O76039 SNORD116-18-201ENST00000383961 92 ntBASIC2.55□□□□□ -2
CDKL5O76039 MIR873-201ENST00000401120 77 ntBASIC2.55□□□□□ -2
CDKL5O76039 AL445687.1-201ENST00000439946 251 ntBASIC2.55□□□□□ -2
CDKL5O76039 RPS20P10-201ENST00000451209 253 ntBASIC2.55□□□□□ -2
CDKL5O76039 AC016925.1-201ENST00000458303 298 ntBASIC2.55□□□□□ -2
CDKL5O76039 RNU6-221P-201ENST00000459541 99 ntBASIC2.55□□□□□ -2
CDKL5O76039 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
CDKL5O76039 AC104435.1-201ENST00000483483 166 ntBASIC2.55□□□□□ -2
CDKL5O76039 AC079804.2-201ENST00000490376 200 ntBASIC2.55□□□□□ -2
CDKL5O76039 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
CDKL5O76039 AC069294.1-201ENST00000608397 350 ntBASIC2.55□□□□□ -2
CDKL5O76039 AC004832.4-201ENST00000608952 331 ntBASIC2.55□□□□□ -2
CDKL5O76039 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
CDKL5O76039 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.55□□□□□ -2
CDKL5O76039 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDKL5O76039 RNU1-91P-201ENST00000364746 163 ntBASIC2.54□□□□□ -2
CDKL5O76039 SNORD116-13-201ENST00000384408 92 ntBASIC2.54□□□□□ -2
CDKL5O76039 MIR626-201ENST00000385032 94 ntBASIC2.54□□□□□ -2
CDKL5O76039 SEPT7P4-201ENST00000437076 306 ntBASIC2.54□□□□□ -2
CDKL5O76039 SNORD65B-201ENST00000459126 73 ntBASIC2.54□□□□□ -2
CDKL5O76039 RNU6-1337P-201ENST00000516525 95 ntBASIC2.54□□□□□ -2
CDKL5O76039 AC027419.1-201ENST00000522976 328 ntBASIC2.54□□□□□ -2
CDKL5O76039 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.54□□□□□ -2
CDKL5O76039 MIR3684-201ENST00000579779 74 ntBASIC2.54□□□□□ -2
CDKL5O76039 MIR4298-201ENST00000584380 73 ntBASIC2.54□□□□□ -2
CDKL5O76039 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.54□□□□□ -2
CDKL5O76039 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.54□□□□□ -2
CDKL5O76039 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDKL5O76039 ZNF720P1-201ENST00000562403 1939 ntBASIC2.53□□□□□ -2
CDKL5O76039 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.53□□□□□ -2
CDKL5O76039 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.53□□□□□ -2
CDKL5O76039 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
CDKL5O76039 Y_RNA.23-201ENST00000362496 106 ntBASIC2.53□□□□□ -2
CDKL5O76039 Y_RNA.24-201ENST00000362508 103 ntBASIC2.53□□□□□ -2
CDKL5O76039 SNORA27.1-201ENST00000362604 124 ntBASIC2.53□□□□□ -2
CDKL5O76039 RNU1-23P-201ENST00000363361 144 ntBASIC2.53□□□□□ -2
CDKL5O76039 RNU6-312P-201ENST00000364629 107 ntBASIC2.53□□□□□ -2
CDKL5O76039 RNU6-418P-201ENST00000384035 107 ntBASIC2.53□□□□□ -2
CDKL5O76039 SNORA8.3-201ENST00000384679 139 ntBASIC2.53□□□□□ -2
CDKL5O76039 TMSB4XP3-201ENST00000445144 114 ntBASIC2.53□□□□□ -2
CDKL5O76039 AC074290.1-201ENST00000448883 135 ntBASIC2.53□□□□□ -2
CDKL5O76039 SCARNA8-201ENST00000515924 131 ntBASIC2.53□□□□□ -2
CDKL5O76039 RN7SKP164-201ENST00000516138 266 ntBASIC2.53□□□□□ -2
CDKL5O76039 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
CDKL5O76039 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.53□□□□□ -2
CDKL5O76039 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CDKL5O76039 SNORD114-7-201ENST00000362520 77 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 RNU6-1205P-201ENST00000363625 106 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 RNU6-275P-201ENST00000364910 107 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 U8.7-201ENST00000364940 136 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 RNU2-32P-201ENST00000411193 191 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 AC016909.1-201ENST00000415916 166 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 AL356320.1-201ENST00000429616 163 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 HSPE1P21-201ENST00000438283 308 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 RPS26P55-201ENST00000471178 356 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.52□□□□□ -2.01
CDKL5O76039 Y_RNA.797-201ENST00000515977 94 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 RNU6-453P-201ENST00000516819 85 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 Y_RNA.802-201ENST00000614892 130 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 AC068647.2-201ENST00000637380 353 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 AC132825.6-201ENST00000638861 357 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CDKL5O76039 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDKL5O76039 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDKL5O76039 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
CDKL5O76039 AL159152.1-201ENST00000635019 2587 ntBASIC2.52□□□□□ -2.01
CDKL5O76039 ZNF658B-202ENST00000615961 3375 ntBASIC2.51□□□□□ -2.01
CDKL5O76039 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CDKL5O76039 RNU6-743P-201ENST00000364151 106 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms