Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL049873.1-201ENST00000480540 376 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 YWHAEP4-201ENST00000505390 198 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF40AO75400 EIF4BP1-201ENST00000554881 351 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 MTND1P7-201ENST00000632801 297 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 MIR338-201ENST00000636369 67 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF40AO75400 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PRPF40AO75400 RNU6-449P-201ENST00000383914 107 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 RNU6-187P-201ENST00000384139 106 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 MIR520G-201ENST00000385064 90 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 RNU6-1228P-201ENST00000391014 107 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 RNA5SP323-201ENST00000391094 133 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 AL606845.1-201ENST00000404881 255 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 RNA5SP492-201ENST00000411330 114 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF40AO75400 RNU7-200P-201ENST00000516105 62 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 RNU7-99P-201ENST00000516271 62 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 MTND5P41-201ENST00000517498 206 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 CYCSP26-201ENST00000534107 320 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 MIR3126-201ENST00000577443 74 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 MIR4431-201ENST00000579990 94 ntBASIC3.2□□□□□ -1.9
PRPF40AO75400 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF40AO75400 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF40AO75400 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF40AO75400 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PRPF40AO75400 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNU6-23P-201ENST00000363283 107 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNU1-96P-201ENST00000364163 162 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNU4-84P-201ENST00000364200 139 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNA5SP496-201ENST00000391240 109 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 AL109933.2-201ENST00000452651 260 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNU1-142P-201ENST00000516682 145 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNU6-1096P-201ENST00000517089 102 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 RNU6-789P-201ENST00000517105 102 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 AC011604.1-201ENST00000545978 196 ntBASIC3.19□□□□□ -1.9
PRPF40AO75400 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
PRPF40AO75400 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF40AO75400 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF40AO75400 RNU6-728P-201ENST00000365375 104 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 RNY1P5-201ENST00000383890 115 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 MIR515-2-201ENST00000384883 83 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 MIR515-1-201ENST00000384884 83 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 RNA5SP467-201ENST00000391274 118 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 Y_RNA.621-201ENST00000411065 96 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 AC107027.2-201ENST00000512197 115 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 RNU6-826P-201ENST00000516827 104 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF40AO75400 AC004486.1-201ENST00000546846 233 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 MIR2681-201ENST00000581814 105 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 AL929325.1-201ENST00000603096 117 ntBASIC3.18□□□□□ -1.9
PRPF40AO75400 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF40AO75400 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF40AO75400 RNA5SP493-201ENST00000364115 91 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 RNY3P5-201ENST00000384127 102 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 MIR15B-201ENST00000385045 98 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 RNU6-239P-201ENST00000390990 99 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 Y_RNA.580-201ENST00000391004 95 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 AC018634.1-201ENST00000437554 401 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 AC023449.1-201ENST00000454464 154 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF40AO75400 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF40AO75400 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.17□□□□□ -1.9
PRPF40AO75400 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF40AO75400 Y_RNA.203-201ENST00000364106 102 ntBASIC3.16□□□□□ -1.9
PRPF40AO75400 SNORA25.6-201ENST00000364121 118 ntBASIC3.16□□□□□ -1.9
PRPF40AO75400 RNU6-1130P-201ENST00000365434 107 ntBASIC3.16□□□□□ -1.9
PRPF40AO75400 MIR29C-201ENST00000385231 88 ntBASIC3.16□□□□□ -1.9
PRPF40AO75400 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF40AO75400 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF40AO75400 SCARNA15.3-201ENST00000626315 122 ntBASIC3.16□□□□□ -1.9
PRPF40AO75400 SCARNA4.1-201ENST00000628597 123 ntBASIC3.16□□□□□ -1.9
PRPF40AO75400 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRPF40AO75400 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
PRPF40AO75400 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PRPF40AO75400 Y_RNA.111-201ENST00000363248 100 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 SNORA80A-201ENST00000363922 136 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 SNORA8-201ENST00000384574 139 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PRPF40AO75400 RN7SKP101-201ENST00000411376 320 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.15□□□□□ -1.91
PRPF40AO75400 AC233266.1-201ENST00000454518 96 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 RNU6-346P-201ENST00000516288 111 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 RPPH1-2P-201ENST00000516688 293 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 MIR3670-2-201ENST00000582974 65 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 MIR3670-1-201ENST00000584160 65 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 MIR3670-3-201ENST00000584855 65 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 AC242852.1-201ENST00000612151 96 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 MIR3670-4-201ENST00000612260 65 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 AC244015.1-201ENST00000622301 99 ntBASIC3.15□□□□□ -1.91
PRPF40AO75400 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRPF40AO75400 AC100821.1-201ENST00000523153 2479 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 RNU1-109P-201ENST00000383960 147 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 Y_RNA.587-201ENST00000391210 103 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 MIR1278-201ENST00000408753 81 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 AC006461.1-201ENST00000412637 326 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 CST2P1-201ENST00000425770 87 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms